Protein Info for MPMX19_03595 in Azospirillum sp. SherDot2

Annotation: C4-dicarboxylate transport protein 2

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 425 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details transmembrane" amino acids 44 to 69 (26 residues), see Phobius details amino acids 81 to 103 (23 residues), see Phobius details amino acids 150 to 167 (18 residues), see Phobius details amino acids 196 to 220 (25 residues), see Phobius details amino acids 226 to 247 (22 residues), see Phobius details amino acids 291 to 340 (50 residues), see Phobius details amino acids 352 to 375 (24 residues), see Phobius details PF00375: SDF" amino acids 6 to 401 (396 residues), 388.4 bits, see alignment E=2e-120

Best Hits

KEGG orthology group: None (inferred from 96% identity to azl:AZL_b05170)

Predicted SEED Role

"Na+/H+-dicarboxylate symporters" in subsystem Propionyl-CoA to Succinyl-CoA Module

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (425 amino acids)

>MPMX19_03595 C4-dicarboxylate transport protein 2 (Azospirillum sp. SherDot2)
MNKQTTLIIVAMLLGIVTGYVCNSLFDAATAKEIAGYFAMVTDIFLRLIKMIIAPLIFAT
LVAGMAGMGDARTVGRIGGKAVGWFLMASFVSLFIGLIFANLLHPGANVGVPLPDVAASA
GLKTSALNLKDFLTHVFPRNFFEAMANNEILQILIFSVFVGLAIGQLRDTKAGLLARSIE
EVVPVMLKVTDYVMRFAPIGVFAAVANVVTTQGLGVLLVYGKFMGSFYVALAVLWAVLVF
AGFVVLKGDVFRVVKAMRQPMLLGFSTASSESAYPRVMEELKTLGVRERVIGFVLPLGYS
FNLDGSMIYTAFASLFIAQAYGIPLTLEQQIVMLLVLMVSSKGIAGVPRSSLVVVAAVLP
MFHLPEAGVLLIMGIDHFLDMGRTATNVLGNGIATTVVAKWENAIGGQEDEEEAGAALPS
PAAAE