Protein Info for MPMX19_03522 in Azospirillum sp. SherDot2

Annotation: Flavohemoprotein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 699 transmembrane" amino acids 441 to 461 (21 residues), see Phobius details PF01243: Putative_PNPOx" amino acids 40 to 130 (91 residues), 30.9 bits, see alignment E=4.9e-11 amino acids 173 to 268 (96 residues), 39 bits, see alignment E=1.5e-13 PF00970: FAD_binding_6" amino acids 338 to 432 (95 residues), 30.6 bits, see alignment E=7.1e-11 PF00175: NAD_binding_1" amino acids 443 to 563 (121 residues), 32 bits, see alignment E=3.3e-11 PF00111: Fer2" amino acids 628 to 684 (57 residues), 36.6 bits, see alignment 7.1e-13

Best Hits

KEGG orthology group: K07006, (no description) (inferred from 70% identity to agr:AGROH133_15099)

Predicted SEED Role

"Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)" in subsystem Bacterial hemoglobins or Flavohaemoglobin or Glutaredoxins (EC 1.14.12.17)

Isozymes

Compare fitness of predicted isozymes for: 1.14.12.17

Use Curated BLAST to search for 1.14.12.17

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (699 amino acids)

>MPMX19_03522 Flavohemoprotein (Azospirillum sp. SherDot2)
MTAALKTLPPWHEGETFIQRKLGVAERMEAVGQRVIRDHMPDQHRDFYAQLPFIVLGSVD
PAGDPWATLLVGKPGFLSSPTPTRLDIATQADPGDPAGEGMRDGDPIGLLGIEMHTRRRN
RMNGVVTAIGSGFRVDVDQSFGNCPRYIQLRDVDYARDPAEPFTGVVEVLPQLDEQARTM
IGEADAFFVATYADRAERRQVDVSHRGGKAGFVRVAEDGTLTVPDFNGNLFFSTLGNIVL
NGKAGLVFVDYGSGDMLQMTGDAEVILESPEIAAFQGAERLWTFKPRRILRRAGALALRW
SFRKEGWSPSSLMTGDWAQAAARMQARELATRWRPYRVTKIVDETPAIRSFHLQPADGAG
LLPHAAGQHLPIRVMVPGSDKPVIRTYTLSAAPSDGHYRISVKREGLVSRHLHDRILAGD
IIEARAPDGAFTIDPYGTRPAVLLAGGIGITPLLAMLRHVVYEGLRKQRMRPTILIQAAR
SMSERPFDREIAELVNAAQGATGQGTATQGAVRWIRVLSEPGAAKEGVDYEAAGRIDMAL
LTRFLPFDDYDFYLCGPSAFTQALYDGLRSRNIADGRIHAEAFGPSSLQRTADVGAAPPP
ARPLPSSKPVPVAFMTSLKEDRWTPSSGTLLELAEARGLEPEYSCREGTCGTCRTKLLKG
AVTYVREPGASVAPDEVLICSAVPAETGPDDENRIQLAL