Protein Info for MPMX19_03387 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1019 PF01315: Ald_Xan_dh_C" amino acids 42 to 153 (112 residues), 97.8 bits, see alignment E=1.4e-31 PF02738: MoCoBD_1" amino acids 170 to 416 (247 residues), 228.2 bits, see alignment E=2.6e-71 PF20256: MoCoBD_2" amino acids 449 to 757 (309 residues), 233.8 bits, see alignment E=9e-73 PF10604: Polyketide_cyc2" amino acids 856 to 995 (140 residues), 45.7 bits, see alignment E=2.7e-15 PF06240: COXG" amino acids 857 to 993 (137 residues), 94 bits, see alignment E=2.1e-30 PF03364: Polyketide_cyc" amino acids 861 to 981 (121 residues), 26 bits, see alignment E=2.9e-09

Best Hits

KEGG orthology group: None (inferred from 94% identity to azl:AZL_a11020)

Predicted SEED Role

"Carbon monoxide dehydrogenase large chain (EC 1.2.99.2)" in subsystem CO Dehydrogenase (EC 1.2.99.2)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.2.99.2

Use Curated BLAST to search for 1.2.99.2

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1019 amino acids)

>MPMX19_03387 hypothetical protein (Azospirillum sp. SherDot2)
MTATQTAAHTIDSEGVSPQPQPAAVPFVGRAMPRVEDAALLTGVARYADDLPVKPGTLHA
AILRSPHAHADLLDIDFAAALAVPGVAAVVTGADAKRLASAFLVGIRAPMEHWCLAIDRV
RHVGEPVAVVLADSRYVAEDALDRIEVRYRPLPPVTSIAQALEKESELLHPAVGSNLVNS
RSFRYGDPEAAFARAAHAVSVEVEYPRNSCTPMECFVVLADYDAAEDAYEVLSNFSGPFA
VHPVMARALNVPGSRLRLKTPPHSGGSFGNKQAVFPYVVLMGLCARVAGRPVKWVEDRLE
HLMAATSATARRMRIDAAVEPDGRVLALRMEQTEDCGAYLRAPEPASLYRNHGNLTGAYD
IPNLTVTNRIVVTNKTPTGLNRGFGGGQLYYGLERLMNRVAAELGLDPLDVIRRNLVAAD
AMPYRTASGGTLDSGDYRATLEQAVREGALDALKARREALRAEGRLYGIGYAAVVEPSIS
NMGYITTVLTAVERRKAGPKNGAQATASVAVDPTGGVSVTVASAPQGQGHRTVLAQVVAD
VFGLRFEDIRVNTDLDTGKDAWSIASGNYSSRFAGAVAGAAQVAATRLRGRMAALVAGQL
NCRAEDVRFTGGKVFSDANPDNGLSFSRVAAAGHWAPGTLPDGQEAALRETAFWTPEPLK
APTDADHINSSACYGFIFDFCGVEIDRTTGSLRIDRYVTMHDAGRLLNPLLVEGQILGGF
AHAVGTALYEEYAYGDDGRFLSGTFADYLVPTACEVPVPVILHRESPSPVTPLGAKGVGE
GNCMSTPVCLANAVADALSGMSVAGVSVAEPPSLPITPAKLAALIHPPEPPRPASAASAM
ETPPAAVKGGRGLTGEGSREVPATPEQVWAILLDPKELAALLPGCEALDLVGPNAYRAEV
VVGIGPVRGRYTAQVALSDLDPPSALTLTGSGTSALGSGSGTGHVTLERTATGTRVTYRY
SASVGGKVAAVGGRMLDSASRLLIGQFFEKLVARAGGTEVPAGSPSLLTRLLRLLGFDR