Protein Info for MPMX19_03351 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 544 signal peptide" amino acids 1 to 38 (38 residues), see Phobius details TIGR03908: quinohemoprotein amine dehydrogenase, alpha subunit" amino acids 43 to 543 (501 residues), 651.7 bits, see alignment E=3.6e-200 PF09098: Dehyd-heme_bind" amino acids 46 to 209 (164 residues), 230 bits, see alignment E=2.5e-72 PF14930: Qn_am_d_aII" amino acids 219 to 322 (104 residues), 99.6 bits, see alignment E=2.3e-32 PF09099: Qn_am_d_aIII" amino acids 336 to 405 (70 residues), 43.4 bits, see alignment E=7.1e-15 PF09100: Qn_am_d_aIV" amino acids 411 to 543 (133 residues), 178.4 bits, see alignment E=1.1e-56

Best Hits

KEGG orthology group: None (inferred from 47% identity to eba:ebA5178)

MetaCyc: 46% identical to quinohaemoprotein amine dehydrogenase alpha subunit (Pseudomonas putida U)
1.4.98.-

Predicted SEED Role

"Quinohemoprotein amine dehydrogenase alpha subunit (EC 1.4.99.-)" (EC 1.4.99.-)

MetaCyc Pathways

Isozymes

Compare fitness of predicted isozymes for: 1.4.99.-

Use Curated BLAST to search for 1.4.99.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (544 amino acids)

>MPMX19_03351 hypothetical protein (Azospirillum sp. SherDot2)
MGQKPRGPGRWPGLLLGAVAGGVVFGGALTTAQDALAEDSRTPDRALVEERCSACHQKEA
DGSLHRIDHVRKTPEGWTMTLFRMRQFHGVALSDEEQRTLVRYFADRQGLAPEEAAPYRY
VLERRPSVVEEPVTDGDLSVMCARCHSVARVGLQRRDEDEWRRLVNFHLGQWPTIEYSAQ
GRDRKWWEIASTEIPQTLGGKFPFRTDAWTSWQAAPKPDLSGRWAVAGHRAGIGSYGGTA
TVTKDGDGYRIAYDLTDSAGKPLTGDGRSTMFTGYEWRGTGTLDGKPVREVFAASRDGSR
LDGRWFLTQQDEVGGSLHAVRAGGADSTILGTSQSFLKAGSTARVTLWGSGLDRGEVGFG
PGVSAKILSRSPTSVTVEATAAADAAPGARSLTVGGAKAAGFAVYATLDSIRVEPDFTIA
RVGGNGGPVPPMTAQFEAVGYLNGPDGKPGTDDDVRVGPMPASWKVEPFNDAAAQMEDVK
FAGAMGANGLFTPAGAGPNPQRQFGTNNIGDLKVVGTVIDGSATLTGTGRLISTVQRWND
PPIH