Protein Info for MPMX19_03330 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1110 transmembrane" amino acids 605 to 626 (22 residues), see Phobius details amino acids 638 to 659 (22 residues), see Phobius details amino acids 671 to 694 (24 residues), see Phobius details amino acids 714 to 735 (22 residues), see Phobius details amino acids 742 to 769 (28 residues), see Phobius details PF13458: Peripla_BP_6" amino acids 23 to 375 (353 residues), 124 bits, see alignment E=2.3e-39 PF01094: ANF_receptor" amino acids 43 to 365 (323 residues), 43.7 bits, see alignment E=4e-15 PF00924: MS_channel_2nd" amino acids 761 to 827 (67 residues), 59 bits, see alignment 8e-20 PF00027: cNMP_binding" amino acids 972 to 1056 (85 residues), 65.1 bits, see alignment 9.1e-22

Best Hits

KEGG orthology group: None (inferred from 86% identity to azl:AZL_b00460)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1110 amino acids)

>MPMX19_03330 hypothetical protein (Azospirillum sp. SherDot2)
MPSLTSRSAIRDSAGTVRIAYAGNLSEGGQDIVRALGLLADGINATGGIDGLQLQFVPFD
DHGVSPSARKAAAEIVEDDSILAVIGHDSSATSLAAAPIYAAAGIPALSPMASETSLTRN
NAWYFRIGHSDEREAAFMADYVRLGLLADSVALLRTPQTVTERLAGPLRDVMPQRGVGLR
LDAAINPAAAGFARDIADFVGTLRGLSAETVVVLLATEEPAVMLIQALRDAGVTNRILGP
NWLGAPSFGKQLSRLPRESSHPGLYTGKLFVISSFLPDIANQQANRLLAAYDARFGPLGN
WAALYAYDAGQLLVAAVRRAGLAGSWSTRASARRMVRDQLAAIRSVLHAVPGVTGPLYFG
EDGTPERALGIGQFTTGAGPDDGLTTALTQLRYAADADGSGGNGNRGAMRPLSVVHVGMS
VSRISDIDPVNRSARIEFDLWFRYRNVPDSPPPEAVTDIQFLDTVEPVMVGVPVEQARNG
DEDYRLYHVTGRFLMDAWQDARAPLGGHRVGLRFRSRDLNHERMIFAADEGDGSAHRDLA
RVLAGRKVAGAGWAVTDAVLTADIPAAVPGAQIRPEERRAGRDAPTVRFELSIEPQDRGL
RRQIGGLPALIGVWGACLLLLALRGAEAWQSDRRFPRLFLLVESAATGVGLLAAESALID
GFARIDAERAMAATVTAFDVAWWLVPALFINLALHRFAWDPLEASSERAIPQVVKSTVSL
LILILAVFGVIAQVFQKDLTSLLATSGVLAMIIGLSLQSNLSNIFSGMVLNLERPFRRGD
WIKVGDAPIGQVIDISWRSTKIQTFNNTVVSIPNAVAAGTRIENCSHPNNRFIAQMLLHV
TLGHDPDRIVNLLTDALRLVKSVDGRKHLGLVWVKFNGIDEFGMRFLVSFDLTDRSLLQS
QEHAVLISIHSVFRHAGVTLAQRHANIRLVEGGTDAADAHPDAASLIAAAPLFQPLDNPA
RERLAAGARPQRVAIGTPLYRQGDAGRSLFLVAEGIVTLSTTGLDGTEIELSRLGPGALF
GESALLDGAARTSSARTLGPALLYEIDETVLAQALDGQPSLRDLLGRIASTRSADGHGSG
RPDEDDRQRGQGTGMLARLRDAFGFSDVNA