Protein Info for MPMX19_03319 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 649 transmembrane" amino acids 12 to 32 (21 residues), see Phobius details amino acids 191 to 213 (23 residues), see Phobius details PF02203: TarH" amino acids 1 to 171 (171 residues), 72.8 bits, see alignment E=8.6e-24 PF12729: 4HB_MCP_1" amino acids 4 to 183 (180 residues), 83.4 bits, see alignment E=3.9e-27 PF00672: HAMP" amino acids 208 to 250 (43 residues), 32.4 bits, see alignment 2.3e-11 amino acids 304 to 349 (46 residues), 16.8 bits, see alignment 1.7e-06 PF18947: HAMP_2" amino acids 285 to 349 (65 residues), 55.2 bits, see alignment E=1.4e-18 amino acids 342 to 392 (51 residues), 26.4 bits, see alignment 1.4e-09 PF00015: MCPsignal" amino acids 460 to 627 (168 residues), 78.9 bits, see alignment E=1.1e-25

Best Hits

KEGG orthology group: K03406, methyl-accepting chemotaxis protein (inferred from 93% identity to azl:AZL_b00350)

Predicted SEED Role

"Methyl-accepting chemotaxis protein I (serine chemoreceptor protein)" in subsystem Bacterial Chemotaxis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (649 amino acids)

>MPMX19_03319 hypothetical protein (Azospirillum sp. SherDot2)
MFKNLKIGKKLAVLVVVLNAFTAIIGLIALHGMKMGNDALDTVYNDRVVPLRDLKVIADL
YAVNIVDMAHKARNGNMPTEAALAAIDAARTGIREKWRGYLATYLVDEEKALVAKAEPLM
ADADRAADRLRGILAAGRSERLDRFVIDELYPAIEPVSDAMSALIELQLTVAKSVYQQND
ALYDLTVRRTIGLLIGAVLVGVALGVAIIRSITVPLGQARDVIDRMARGDLNVTVADDGR
RDEIGHMLRATAGIAATLKAVAGDLRDLIEAARGGALSVRVEPERHAGEFAVLVRGANEL
VEVLTTPLFEVASVMARLSSGDIRGRMTGSYEGDLRALKGNVNRSIDALALLLDEISGFA
GALAQGDVTRTVDGAHQGDFAAIKNNLNRAVEQLAAVLRAVNGSTEQVATSATETAAAAI
DVSRQAAGQMMTLADVSGAIEQTAGAIGEIARNAERGSTLARGTADLAEDGQRTLISLTR
AVDGIAERTAGIERISALIAGIADKTYVLALNAGLEAVRAGESGRGFGLIAAKISSLAED
VTAATRDIGTLVREASAGVETGVQAAGEAAEAIGRIVEASRDSGSTAQSIAAAIDEQNAM
ASLLKDRVEQLSMTGQATAGAAEEISATMASLTDMAQRLKAETARIRTA