Protein Info for MPMX19_03316 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 409 transmembrane" amino acids 21 to 43 (23 residues), see Phobius details amino acids 71 to 93 (23 residues), see Phobius details amino acids 100 to 120 (21 residues), see Phobius details amino acids 126 to 143 (18 residues), see Phobius details amino acids 173 to 194 (22 residues), see Phobius details amino acids 259 to 281 (23 residues), see Phobius details amino acids 288 to 306 (19 residues), see Phobius details amino acids 312 to 328 (17 residues), see Phobius details amino acids 337 to 358 (22 residues), see Phobius details amino acids 364 to 382 (19 residues), see Phobius details PF09594: GT87" amino acids 74 to 299 (226 residues), 35.9 bits, see alignment E=3.5e-13

Best Hits

KEGG orthology group: None (inferred from 82% identity to azl:AZL_c01420)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (409 amino acids)

>MPMX19_03316 hypothetical protein (Azospirillum sp. SherDot2)
MNSNGILLSRVLRGGDARHRDASAVAVVVWCLFVVAMAVLAVVRPERPITHIYRDAVIDW
WSSVPVYTQGIHGFLYFPSSAVLLGPLAALPLGLGDQIWRLAMVAVFSGAVYRVALLLHP
NMGRTLAAWVLVAAIPTASINVLRGQCELMMMSVVLHAAVDLAHRRDRRGATMLALAVAL
KPLALVPALLFAVVRPGVRRPLALGLLIAAAAPFLHPDPGYVAGQYAAMIAKLATAAAPD
SGRWFDLTRMLAEAGVQPAYATMTALRLAGALLVVGIVWMAGRRLDHATGMIVTAMLGAW
YLVLFNPRTEEGSYLSIAVLTTLAALVEHRRPRAGAVPMLLGLAVAGLGLHFYGGWFYRP
TQMWLKQSLTLALLVYPVWLVVSRRSLLAHSVPADGQVLHCFSGEVGES