Protein Info for MPMX19_03264 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 725 signal peptide" amino acids 5 to 6 (2 residues), see Phobius details transmembrane" amino acids 7 to 27 (21 residues), see Phobius details amino acids 50 to 71 (22 residues), see Phobius details amino acids 89 to 109 (21 residues), see Phobius details amino acids 116 to 136 (21 residues), see Phobius details amino acids 144 to 171 (28 residues), see Phobius details amino acids 213 to 236 (24 residues), see Phobius details amino acids 248 to 270 (23 residues), see Phobius details amino acids 290 to 317 (28 residues), see Phobius details amino acids 338 to 360 (23 residues), see Phobius details amino acids 396 to 414 (19 residues), see Phobius details amino acids 446 to 471 (26 residues), see Phobius details amino acids 508 to 534 (27 residues), see Phobius details amino acids 546 to 566 (21 residues), see Phobius details amino acids 574 to 594 (21 residues), see Phobius details amino acids 634 to 657 (24 residues), see Phobius details amino acids 678 to 702 (25 residues), see Phobius details PF00528: BPD_transp_1" amino acids 232 to 416 (185 residues), 49.5 bits, see alignment E=2.2e-17 amino acids 524 to 701 (178 residues), 47 bits, see alignment E=1.3e-16

Best Hits

KEGG orthology group: K02011, iron(III) transport system permease protein (inferred from 60% identity to oan:Oant_3844)

Predicted SEED Role

"Ferric iron ABC transporter, permease protein" in subsystem Campylobacter Iron Metabolism or Iron acquisition in Vibrio or Transport of Iron

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (725 amino acids)

>MPMX19_03264 hypothetical protein (Azospirillum sp. SherDot2)
MKRHLGFWLAAGWAAVLVLPWHIGGVWPVFWPAGPQSGPAAGDGMPALIQGLLLGRPWLL
ASVLPLLAALAGLRAKDRATSGADGRARSAWLTAAGAGGLGWLLVESIAVTQPGLGLGAA
AYAVVCLVLGAHGLALRGWCKGDVFIVASIGLVLGSILVFVGFPVVTILLSAVQDNDGRL
TVVGLFDKLTDSGIWGLGCVLGTGSTCGVAWNTLALAGVVGVLTTGTGLAFALIAVRTGF
RFKAALRLASILPVITPPFVIGLAIILLFGRAGVVTDLLSTLFDIPRSRWIYGMPGVAMA
QILAFTPISFLVLVGVLQGVSPTLEEASQTLRATPWITFRTVTLPLIRPGLANAFLISFI
ESLADFGNPLVLGGNFDVLSTKIFYAVVGAAHDQGRAAVLAIILLSFTLSAFLAQRRWLG
RRSYATVAGKGDAGLPSPLPSGVRIAASAVAALWTGLTVLVYGTILVGGFLKSLGRDNTL
TLIHYQTAFGIETGPNGWWFSGSAWDSLFTTLGVSLVAMPLTAALGLLTAYLLVRQSFLG
RGAFEFLTMLSFAIPGTVIGVSYILAFNTPPLELTGTGLILIIAFVFRNMPVGIRAGIAT
LSQIDKSLDEASLTLGARSFTTLRRVILPLLRPAIVTAMVYSFVRAITSVSAVIFLVTAK
YNLATAYIVGRAEVGEYGLAIAYSSVLIAIMVVALLAIQLLVGERRLGRRTAALPVSTSA
SKVNA