Protein Info for MPMX19_03233 in Azospirillum sp. SherDot2

Annotation: Iron(3+)-hydroxamate import system permease protein FhuB

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 664 transmembrane" amino acids 16 to 35 (20 residues), see Phobius details amino acids 60 to 85 (26 residues), see Phobius details amino acids 97 to 116 (20 residues), see Phobius details amino acids 125 to 144 (20 residues), see Phobius details amino acids 151 to 176 (26 residues), see Phobius details amino acids 196 to 223 (28 residues), see Phobius details amino acids 232 to 274 (43 residues), see Phobius details amino acids 285 to 307 (23 residues), see Phobius details amino acids 314 to 333 (20 residues), see Phobius details amino acids 354 to 375 (22 residues), see Phobius details amino acids 397 to 417 (21 residues), see Phobius details amino acids 429 to 448 (20 residues), see Phobius details amino acids 454 to 474 (21 residues), see Phobius details amino acids 485 to 505 (21 residues), see Phobius details amino acids 525 to 546 (22 residues), see Phobius details amino acids 553 to 570 (18 residues), see Phobius details amino acids 573 to 574 (2 residues), see Phobius details amino acids 576 to 600 (25 residues), see Phobius details amino acids 612 to 633 (22 residues), see Phobius details amino acids 640 to 661 (22 residues), see Phobius details PF01032: FecCD" amino acids 23 to 330 (308 residues), 201.3 bits, see alignment E=9.9e-64 amino acids 391 to 662 (272 residues), 224.6 bits, see alignment E=8.1e-71

Best Hits

KEGG orthology group: K02015, iron complex transport system permease protein (inferred from 52% identity to mci:Mesci_5936)

Predicted SEED Role

"Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), permease component FhuB" in subsystem Iron acquisition in Vibrio or Siderophore Aerobactin (TC 3.A.1.14.3)

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (664 amino acids)

>MPMX19_03233 Iron(3+)-hydroxamate import system permease protein FhuB (Azospirillum sp. SherDot2)
MADTAIPTPSRRFGPVWPVTGLFLLAGLASFLVLGRQLPPELWWRALVDPDPARLDQLAA
HYVLFPRFAVALMVGAALGLAGTILQQVLRNPLAEPATLGIAAGAHLSLAVATLWLPDAL
ALGREWVALAGAGLSAAALLALSWRKGLSPVTVVLAGLVLSLYAGSVSGVMVLFNHDLLI
GLFLWGAGFLDQQDWGMAAFLAPRLAVLAVAAALVLRPLVLLGLGEGGARSLGLSVVGAR
LAGLLIAVMLAALTVAAVGVVSFVGLAAPTIVGMAGARRLGQRMLWAPLCGAALLWATDA
LVLMAPVTYRELPTGAVTAVLGVPMLLWLLPRLRTSAPPVMSAAAQPPRASRPALVLAGA
ALLLPLALWMAVAFGPGPDGWGWSSGGDLAALAPWRLPRALAALSGGAMLAVAGAMLQRM
TGNPLAAPEILGVSSGAILGVIVLMFSADAPERGAQIAAGGAGAVAVLAAMLALGRKDGF
SPDRLLLAGIATSSISGVVVAVLMAGQDPRLQTLVTWLSGSTYMVGWTDGLAAVLLALLA
IGAIPFVARWLDLLPLGGGVAAALGVSPSLSRIALFSLSALLTAAATLIVGPLSFVGLMG
PHLARMLGLQRAAAHLAGSAMLGGLIMLMADWLGRSVIFPYQVPAGLLASVIGGPFLLWL
LGRR