Protein Info for MPMX19_03224 in Azospirillum sp. SherDot2

Annotation: Protein DipZ

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 591 transmembrane" amino acids 6 to 27 (22 residues), see Phobius details amino acids 40 to 64 (25 residues), see Phobius details amino acids 73 to 95 (23 residues), see Phobius details amino acids 113 to 142 (30 residues), see Phobius details amino acids 151 to 172 (22 residues), see Phobius details amino acids 192 to 214 (23 residues), see Phobius details PF00578: AhpC-TSA" amino acids 283 to 390 (108 residues), 43.7 bits, see alignment E=5.2e-15 PF08534: Redoxin" amino acids 283 to 394 (112 residues), 40.2 bits, see alignment E=6.1e-14 PF13905: Thioredoxin_8" amino acids 293 to 388 (96 residues), 28 bits, see alignment E=4.5e-10 PF17991: Thioredoxin_10" amino acids 446 to 591 (146 residues), 159.8 bits, see alignment E=1.3e-50

Best Hits

KEGG orthology group: None (inferred from 66% identity to rlt:Rleg2_2053)

Predicted SEED Role

"DipZ protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (591 amino acids)

>MPMX19_03224 Protein DipZ (Azospirillum sp. SherDot2)
MILFLVSFLAGALTIVSPCILPVVPFVFSRAGQPLFRSVLPMLFGMVASFAGVATLSAVG
GGWAVEANGAGRTAALALMAVFGWTLLSPRAAAVLSRPLVAVGNRLSGRAGVAGSLLLGV
ATGLLWTPCAGPILGLVLTGAALHGASLQTTLLLAAYAAGAATSLTFALLAGGRMLAAMK
RSFGVGERLRQGLGIAVLAGVGVIALGLDTGLLARLSYAGTSGVEQSLIDRFAPVVANDA
VSGAPETSGRGLELADARRVYHSSLPVEGILPSLDGATDWLNAKPLTTEELRGKVVLIDF
WTYSCINCIRTLPYLRAWAEKYRDQGLVVVGVHAPEFAFEKRIGNVQKALRDFAITYPVA
IDNDFRIWRAFGNSYWPAFYIADATGRIRHHRFGEGGYEQTERVIQDLLAEAAGGRAAEG
PASDGGLVSPAGKGAQAPADLGEVRSGETYVGYRQAANFASPERDGIERPQDYTVGALRL
NRWGLSGNWTVGAEQARLNRAGGAIVYRFRARDLHLILGPAQDGRPVRFQVTVDGMAPGR
DHGTDTDAEGNGTVSETRLYQLVRQAGAVRERTFEVRFLDPGVDAYAFTFG