Protein Info for MPMX19_03108 in Azospirillum sp. SherDot2
Annotation: hypothetical protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
No protein families (PFam or TIGRFam), signal peptides, or transmembrane helices were found in this protein.
Best Hits
Predicted SEED Role
No annotation
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Compare to protein structures
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (1772 amino acids)
>MPMX19_03108 hypothetical protein (Azospirillum sp. SherDot2) MTDTQSNTAAASAAAASDTIVDPLWPGPSLFVPIGIECLLVGVPNQQGSWAALGIDYRKV PANVDPEPQPFQLRPANAPPGTGAHLQATLPMGYRQGQQQPDGSVLFPPIPNRWLVARSV VTTPGAAPVFTVWVLQGDFLGDMGEGSNTYPDPVQTGNTQWVGRAFTFDNWTNPAGPAQP LLRSVGPGSVSWVVTYDNTLNVLSFYDSLSDVSAGNVTYAMLGWYSPSGFDPLLGVTDAD PQGFTTQDEWQSILNTLLLNVHGESGLAAAEAAWQDWQAANPISGGATIPAIQMQLAGQT LCHGMVFDMAWNGPQQSYPRDPVLNGQNPVSVAVGSTGVEAIAAWMATILNQPDLEDLIL AVQQDLVFDYLQQPSVFATRTLEARFAKADGGTVWLVARPDYDPSDRGRTLQTVDLSPAQ TQALTALNDDQAALDGTSQLIASNVWQLFALVYKLQQLGPFSPDTQTVQDAIDAVMATLT TLDAQRTAQAAAVEVDKTALLGLLGSEFVLSSNGNTRFHAPAATTVMVAGAQQDTRLLPP GTDGGPEDSLFSRFTGQTVSALTVIEPVGGTTQTIDANDLTSRVPTLPPASSGVPKEMTD YLVEVMLFDTSNARFLAAIAYQKAGVTPTSAQLDTLAATIAAQQTAPWNATPATPYTEET VGAAVGFTGVVPLKRSVLPWSPPWTPLYIDWQVTWYPTAAAAAGMLDGWTLEGFDYSWTG TAIGTASETISGRSLVGTQIAAGLAEKLNDLVTLNPNFDELPQYQQDALTQAAADIAEYD IVTEALSGFGGFMLMQQGQMTELTSDDPAVESWLELAPSVVPLPGSGTDGSAPGFYPVRS GHYVINQLWVVDAFGQILRTTNPGQDVLPIRSKSVATPDAGGQDNKRFVQVAPRIQQPAR VALTLLDAEDDAIPTNSSNLTSPVAGWLLPNHLDNSVQVFAADGTPLGEILPVETDTGRG IRWDPAPGLNLPLGSPPAIGNAHLLGFVQGLLAQGPVSGDQALQDLLDVIDVTLWRTTAT PQPDGDNLAVLIGQPVAVVRADIALHLDGDPACDQSWAATGKNDDGGVTAMPFPVYVGDI AYDGNGALGFFLDDDYSLLNPLRGFDTAFGTVRRALSSRTGNPRSNLGRAMARLPTLLAA GSPATSSGYLNPDPSFPLLPDGPVHRLTVLMDPRGSIPAVSGILPVETVSLPPGVVSAMN TLLATFRVGPLLIDPREVQMPLPGNVSGTWSWIARTGVTVWETVANLKSSQPQALLPTAI PAAREGWLGLVPTPASGPSSGQSGGSLKTTRPVADQKLAHMQFHERYKAMAAAPTATTPP YYQYRFDPNSLIIGATTAPTLTVTNPNATTALTGTQTIYVKIPVGSGADAIATSLGGVSV TTSTPTWLALPFFSTNPPYIKLTGPALAAGASLSVYFNNLVVNDAVGTAAFPVQESFTGG GTTAVTIAKTNQPLAIQQFYANPITVAQGQSTTLNWTVSGGSYVLIQPGNIKRPVQGSSF TDSLQMPVSQAQTIYTLQLYTDDRQFKQDVTTAYLGPVSATLSCDPSGPIDTDASAVLSW SSTYAVTPLYLSTPSGAQRVGAQGQQPVVPGNYLTGNQSSVTFSLQALGYQGPVNRTATV TFNPVRIRWFRYTDATLTQVTYNVVNPSPGSPTLSTSGQDYTLTAYGPGAGSGPLVGHLG PGPYLQVQLLSATPSPATPGATVTVSYQTLNATSATLAIGNQTAISVPLDTTKQTGQTTI TAPSASTVLTLTISGNGQAPVSSELDLPVTTG