Protein Info for MPMX19_03105 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 500 1000 1500 2000 2500 3247 transmembrane" amino acids 2156 to 2175 (20 residues), see Phobius details amino acids 2187 to 2205 (19 residues), see Phobius details amino acids 2218 to 2241 (24 residues), see Phobius details amino acids 2298 to 2319 (22 residues), see Phobius details amino acids 2432 to 2453 (22 residues), see Phobius details amino acids 2473 to 2491 (19 residues), see Phobius details PF20248: DUF6603" amino acids 2094 to 2595 (502 residues), 457.9 bits, see alignment E=2.2e-141

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (3247 amino acids)

>MPMX19_03105 hypothetical protein (Azospirillum sp. SherDot2)
MTTEPETTETARTGIVPARSNALRGAAAADLLAENLLAVDLTSATSPILIEAAGVEAPAI
QLAVACGLLLPVDGQEGVYQLNPDWFTDPVGKTGQGMSENAVTLALVIAQLIGQASGSSL
GIPVREPGALGTWYPINKPGTDTPSGLYLATQPVSSDSNGSGEPPTVFGLGVMYTTTVTL
GTDEKAELDLVADGPSSIDLKVWGMVPVALLGNGGVEVVVGQAGHPFTMGFEVTGGDGPL
IDAAGFSFTGVRLTVDLSPATDPAVNVSLVITQLTLPTAPGARDFTLADLQAISGAEILA
TAAALAVTALGKLVGDQPSLSYLLPALGLGASVPGVDGVLLPILRWDSFIALAVSGGDVA
RPFVDWFTALATDGPTLSAWMKAVGGAVGGLTGTDATVSGSGTRDDPFAVPVLSVSSVGT
LRLTAGTGTDTAGLRHFYPGLAFASTALVLGSSSAAVTGSAGLEILDFTLATGGGVQGVA
PGRFKAGILLANKDIAQPLYSGTILGGTYSFGALAGGMSVIVADGGATVQPAFSLLSVTT
PTGSYPTIDLTQPGDLVAAAEAELNAAIGDAFNALFGLGTDSEVGPSLAALLGVAPPPGA
TAWPSSLTPPFSLSGLPNSIQFPVEALSRYWAALIRGDVEVDGQPPFSFMVDALGTVLRQ
VGGGSGGVTGSGTGSDPWSMTLGPAGSPAALVAYIADAQTSNGAAKRLVLGLGVGATLPI
AGNTLDLAFRIEALGLDAGAAAGQGIRSAQILPGIGVYGALPSGVSTPAVAGASLQIDKG
GLSLYWSPYDGWHWSMSVAAPTLVVDGVAEPVGTDMNYSDATGLSELVTDQAATFGAILT
GVLGVALYRAQRRGGLALDGWLGLLPNLGPFMPQGIDWPDGMPVLAPTSFTDPIGQVRAQ
LKAVLSTPDRAAAVLGLLGWAIDGTAETAAPVAGTGTQLDPYRVPLDVPWNLQGTLWQDS
GQTMAVPGLSTLLSYTAGDITAVTSVRLDPMGISWSTGEPVAASGVPGLSVQTVLSGTGG
TLVTVDDVAVESVTLGVVLTMDLSGGTASFAATPVLAAKQTDGTVIVLDGTLDPSANSAL
LSIVNAAIGVAAAAFKGDDTFQLVYGVLADLGLAVPAASVDGPYGIDPGGFTALVSSPLG
FLTDRLMAALADATVQPLLFQAIDATLGFSLPAMPEPLLAMLAGLGLVVDADHGYAANAE
AILAVARAPASQLSQRLTALLSDPDARSSVIAAMTHGSQSFPVGPCTLTTANGRIMTLTL
PRGGFTVGSFLDPSMTVRVDLQTGTITATLDCFLPDAGFSVLSTLTYTVGGSAPTVTVSL
VWGDGSVPQPTPLVIWPFDQSAFIDQLAAVGPAYVLATFVAEAVDDMLLAKYPLACSLFQ
AFGLADPDPDTGVWQMKSALGLFEKPVDWLLSDAVVGQDGLLNIAQIQKVLGSLPSGTAG
GLTLAQATNGVLLSGLPYGLQVTVTADPATGLFTVAPALSEAMPLLAGAELQSMGFGLSL
TANYQPGLSGSGRLTAAIPGLDQPLFLQGGYDKGFTLTVGEEGDGKPVLDLVPFGGWQTF
VLQVAAEVAQTLLQTLTQKLLDQLAAEGDTTLTQFVTALRSTAASLDINALVQSLIAAQP
DAAALEAAALAWLRERLQPEQAAATASAVAGLLQLALSGVSSDGGLLVYAPSKSVPVTVM
AGVRTVGAETLAGIWATLSVTAADSVVVALTPTGVGVPLTGTPEARVQFGLSAQAIIALG
QGPGLTVTYDSAGGGVAAAVDPLMKAGVSSSLNAELLPLPFGVATGDGYAGRLEAALAVW
LEGVMVQALPRYVSVVVLNTQTVVSWLNAPLFTGSTLTAGQVLTASQLLVTEDGAYALND
LASLQSLGVEGFLAGFLKALTQTQIQVLSFPDGGGIWLEPGPDASYGVRFAATGLSLKQV
PYLVFQLGATDTEWIALTGADPSQYQPGVAAYLPVDGLIPDFTAVKLRLINIGVDFQGKA
GTPLVDFSRFQLAKIKPRGLLTFDFAQSDPITAYGGGVDVEDIAISLAPDTLTPGANTNP
VAQNLLGSGDATSAGNPAANPGFSMRAGWMSGEDLGVELYDSNGGSQTRIWLPVQRSFGP
VHANKVGIGWDNPTKIGSVLFDGGLTLAGLDVELIDLSVSVNVTQITDYSQYSLDLAGLS
VSFSGGSVSVSGGLLKQNNPLRYDGQLLVKAGSFSLYAVGSFALIPVDPDRPDGDKAVSF
FVFLNLNAPLGGVPAFFVNGVAGGFSVNRNIIVPDAGNIMSFPLIQGAISQATFGSDPTP
ASALAVLSQDVYPQIGSYWVAAGLKFSSFQILDVFAMLLVKFGREFEIDVIGVATATLPP
QVQPSSALAYIELALVASFKPDEGEISVTAQLTPSSFLLAKDCKLTGGFAAKFWFGSNPY
AGDFVITLGGYNPSFQPPDHYPNVPRLGFDWPVLSTSVMTVGVSGGTYFALTPSMIMAGG
YLKALFKAGPLKAWFNAGADFLIAWQPFYYYAGVQVSVGVSFGFEVAGVKVTLTAELGAG
LELWGPPTAGKVKVSWYVISFTIPFGDQDQDLSSTQPLSWEEFEARMLPQPDSQTAPQAS
ARTASMMLAAAEEDGTSSGNTDGADATQVVVNIQVSSGLLSDTGEFGPTVQSAPFAIDLR
SVMPASTVTVAESSYQASSPSLGIPPMDLPDIATGMAVTLESQDDQGVWTTLSIDRPGLT
PATLSGGAAAAMWSTQAFDPVGKPSSDFIAGAAFGMTLAATGDHVVDTLAPMDLLTSFGY
EQADPLPLPFAVTPVYTAPAALSQDGRFAVLMGSIMAPAPSTLRSQVMQALEDAQVAVIV
DQNLSVMASFADQIFQAAPSLAKLGFDLATSGPQALAAPQPKRAARVAAVEAPLAPRLLG
TSQAYALPATAPRRIQTATGAAGGAARKGSVLLPAPRVTMRWADADVRPTRGGARTLAGS
GTAPSAIEAGLSLQPGSVAVFDAGRGAGAPMLELTGGTPVMVHAFDKAGRILSSRLVSPS
GGSAEPLPADTAQVTLVGVDSAGTAAVAGWNRHSTLVQAGRYTLLGSGCTVRPQAGPRPQ
RGQRDAAPVAARGPVEGAAMLTRNRVQTGVGSTAPGWVETVFGHTVGTVAVVLDRRADAD
AVTVKIAATGSPWTVEYGVAATPAARIAAGDGTILLYDAASFATLSAEVAGDGERHAVLV
RGVEGLAGVYGLAGMPAEVEAGWDGLSLPALGRSVAPRPALGQGLGRAGAAKAGGPTLLR
FVRSEAA