Protein Info for MPMX19_03050 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 303 PF01136: Peptidase_U32" amino acids 104 to 295 (192 residues), 54.5 bits, see alignment E=5.2e-19

Best Hits

KEGG orthology group: None (inferred from 94% identity to azl:AZL_b00210)

Predicted SEED Role

"FIG139928: Putative protease" in subsystem CBSS-214092.1.peg.3450

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (303 amino acids)

>MPMX19_03050 hypothetical protein (Azospirillum sp. SherDot2)
MTASLTLGPVLFNWPVDRWRDFYARIADEAPVDTVIVGEIVCFKRAPFFAEAMGEVIERL
SAAGKTVWLASPILVGSERERSAMRDLVGSDAGLPDGGLVEANDMGALALLAGRPHAVGP
TINVYNEATLGWMAGRGAVAVSLPAELPAATVAVLAKAGRELGIETEVQVWGRAPLAISA
RCYHARAHGLHKDGCQFVCGNDPDGMPVTTMDGQPFLTVNGTQTMSHGCLCLAAEMPALV
AMGVDRFRLSPQAMDMVRVAEAFRAVLDGRRDGAEVAAELGGLIDAPLVNGFYHDTAGAL
RVA