Protein Info for MPMX19_03025 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 373 signal peptide" amino acids 1 to 35 (35 residues), see Phobius details TIGR02122: TRAP transporter solute receptor, TAXI family" amino acids 39 to 291 (253 residues), 88.5 bits, see alignment E=1.8e-29 PF16868: NMT1_3" amino acids 49 to 266 (218 residues), 57.3 bits, see alignment E=9.8e-20

Best Hits

KEGG orthology group: None (inferred from 44% identity to bbt:BBta_6523)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (373 amino acids)

>MPMX19_03025 hypothetical protein (Azospirillum sp. SherDot2)
MKASLVRLLALGRMLAVGGCIAGGVLGLAGTASATDPRGVNANSGTVGIVSGGVEGTYVR
IAADLASVLDDGDTLRVLPMLGKGSIQNLKDVVLLKGIDVGIVQSDVLAYAKRERLLPNL
DRRIKYIAKLYNEELHILAGPDVTRIEDLAGRKVNVDVQGSGTSMTASLVFDMLGIKVEP
QANDQALALEKLRKGEIAAMAYVAGKPTRLFRDLKAGDGLHFLSVPMSAALLDTYLPSRL
TSADYDGLIAPGEQVDTVAVGAVMAVYGWERDLERHRKVARFVDAFFSKFDEFLKPPRHP
KWKEVNLAADVPGWTRFEPAEQWLRQASAAKEPQTAAARKEEFRSFVEQRGVPPQQAEKL
FEQFLLWQARSPQ