Protein Info for MPMX19_02813 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 471 transmembrane" amino acids 12 to 29 (18 residues), see Phobius details amino acids 42 to 60 (19 residues), see Phobius details amino acids 77 to 97 (21 residues), see Phobius details amino acids 124 to 147 (24 residues), see Phobius details amino acids 155 to 175 (21 residues), see Phobius details amino acids 178 to 178 (1 residues), see Phobius details amino acids 188 to 210 (23 residues), see Phobius details amino acids 230 to 251 (22 residues), see Phobius details amino acids 264 to 288 (25 residues), see Phobius details amino acids 308 to 337 (30 residues), see Phobius details amino acids 358 to 375 (18 residues), see Phobius details amino acids 386 to 404 (19 residues), see Phobius details amino acids 410 to 427 (18 residues), see Phobius details amino acids 433 to 453 (21 residues), see Phobius details PF00474: SSF" amino acids 38 to 377 (340 residues), 69.1 bits, see alignment E=1.8e-23

Best Hits

KEGG orthology group: K03307, solute:Na+ symporter, SSS family (inferred from 96% identity to azl:AZL_b03360)

Predicted SEED Role

"Acetate permease ActP (cation/acetate symporter)" in subsystem Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (471 amino acids)

>MPMX19_02813 hypothetical protein (Azospirillum sp. SherDot2)
MNHFTSEESALILGIVVLYILFTSWLTIRLRSRNNGEFMNAARSMPAAVVGVLLMSEFIG
AKSTVGTAQEAFSSGMASAWSVLGASIGFLLFGLFFAKRIYGSGEYTISAAIAKYYGTST
MRTVSIIMMYALLLVNVGNYISGAAALSTVMNLNLTWAMVIIAVVSTFYYVFGGLKGIAY
VTILHSGLKLLGIALLLGTALSLSGGIGPMVEKLPAHYFTIDGTIGMPTIFAWVIGTVGA
IFSTQFVIQAISSNRSAGEAQRSAFYAAIFCLPLGIMLALIGVTAHYLHPDMKSLYALPV
FLDAMHPLMAAIVTTSLVASVFVSVSTVALAIASLAVRDFYVPWKKPTPEQEFRTTRILS
LIIGFLPLIFVFFVPEILKLSFFTRALRLSITVVAMIGFFLPLFASNLGATLGLLGATVS
TTVWYVMGNPYGIDNMYVALLTPMLVMLVERLIRGRSAPAMVAAPPQADAG