Protein Info for MPMX19_02590 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 846 transmembrane" amino acids 21 to 40 (20 residues), see Phobius details amino acids 260 to 282 (23 residues), see Phobius details amino acids 294 to 311 (18 residues), see Phobius details amino acids 317 to 339 (23 residues), see Phobius details amino acids 352 to 374 (23 residues), see Phobius details amino acids 403 to 421 (19 residues), see Phobius details amino acids 427 to 453 (27 residues), see Phobius details amino acids 483 to 503 (21 residues), see Phobius details amino acids 723 to 744 (22 residues), see Phobius details amino acids 774 to 797 (24 residues), see Phobius details amino acids 807 to 830 (24 residues), see Phobius details PF12704: MacB_PCD" amino acids 26 to 233 (208 residues), 38.6 bits, see alignment E=1.5e-13 PF02687: FtsX" amino acids 265 to 381 (117 residues), 39.4 bits, see alignment E=5.9e-14 amino acids 725 to 837 (113 residues), 46.2 bits, see alignment E=4.4e-16

Best Hits

KEGG orthology group: K02004, (no description) (inferred from 93% identity to azl:AZL_000310)

Predicted SEED Role

"ABC transporter, permease protein, putative"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (846 amino acids)

>MPMX19_02590 hypothetical protein (Azospirillum sp. SherDot2)
MTDLRLALRLARRELRTGLKGFWVFLACLALGVAAIAAVQSVSSGLLDGLASDGRSILGG
DVALRQLYNPPADEQMAALKTGGRVSTSAEMRAMARADDDVRSSLVELKAVDDVYPLYGA
VTLDGGGDLRDALAQKDGRWGAVVEASLVDRLGIKPGDTIHVGEGAYRVAAVLDREPDRA
SSNAFSLGPRLLVALPSLANTGLLQPGSLTWWSTKVALPPDTDLKAWQEGLRARFPDAPW
RMRDYTNASPQIERFIDRMTLFLTLVGLTALLVGGVGVGNAVRSHLDSRARTIAMMKCIG
APGALVFQLYLAQILALALLGIVIGLALGAVAPLALGRLLDGVLPVSAHIGVYPGALALA
ALYGVLTALTFSLWPLGRAREVPAGALFRDVIAPAGGRPRTPYTVAMIVSALALAGLAVL
TAHNKIFALWFVGGSIATFLAFRAAAALVTWGAARVGQGKFGRVRRPGLRLALANLHRPG
NPTAAVVLSLGLGLTVLVAIALIQGNFSRRVSETIPQDAPAFFFVDIQRDQFDPLRDLVT
AIPGASAFEAVPSLRGRIERVNGQDAEKALVNPEQAWILAGDRGITYSATLPKHSTVTAG
SWWPTDYAGPPLISIHQSVAEAFGIGPGATMTVNILGRSFDAKVANVRSADFSSMAINFT
MVFAPGTLEGAPQTWVATVRATPDAETQVQRAVLQRFPNITMVRVKDALDTVAEMLGHIG
TAVRIVAGITLAAGTLVLAGAVAAGHRRRVYDAVVLKVLGATRGDVLRAFLLEYGLLGLL
TAVIAGIIGTLTAWAVLKFLMHWEWSFLPSAVITTALLSTAITLAFGFYGTWRALGQPSA
PLLRNE