Protein Info for MPMX19_02504 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 789 signal peptide" amino acids 1 to 43 (43 residues), see Phobius details transmembrane" amino acids 175 to 198 (24 residues), see Phobius details amino acids 219 to 241 (23 residues), see Phobius details amino acids 252 to 275 (24 residues), see Phobius details amino acids 302 to 319 (18 residues), see Phobius details amino acids 325 to 346 (22 residues), see Phobius details amino acids 392 to 412 (21 residues), see Phobius details amino acids 419 to 439 (21 residues), see Phobius details amino acids 476 to 494 (19 residues), see Phobius details amino acids 513 to 536 (24 residues), see Phobius details amino acids 558 to 577 (20 residues), see Phobius details amino acids 584 to 602 (19 residues), see Phobius details PF21088: MS_channel_1st" amino acids 563 to 603 (41 residues), 35.2 bits, see alignment 1.5e-12 PF00924: MS_channel_2nd" amino acids 604 to 670 (67 residues), 58.6 bits, see alignment E=7.9e-20 PF21082: MS_channel_3rd" amino acids 677 to 763 (87 residues), 23.4 bits, see alignment E=9.8e-09

Best Hits

KEGG orthology group: None (inferred from 90% identity to azl:AZL_028410)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (789 amino acids)

>MPMX19_02504 hypothetical protein (Azospirillum sp. SherDot2)
MIRSATPAANPSSSVWRQLLSGGLAVLLLVGLLAGAGAPVLAASAAPAGAVPAPAAGAAA
PAATAPVVVDEATVQQLEALVGTLENQDARTQLVTQLRNLITAQRGLAQAKEAEGESALP
QTLGARALAFLAARMDVVSRQLVQVANVFSDLPGALSWVQRQVQDDTARERWVQIAIQLA
MILGIGAVAARGIGWLLSRPRHAMAARPVGSSLLRIPMLLGRAVLELAPILGFIVVAYTI
LSVTEPAPRVRLVALAVVNATVITQALLILVRMLFAPDAPNLRLVHTSEAGAKRCYIWSR
RLIAVAVYGYFLAEGAYVLGLPLGAYGALLKLLGVVIAAMLIALILQNRVGVADWMRGNP
LSGDGDPLATARREAEGQGAVLRTARRRFAEIWHVLAILYVVVTLGVWVLNVYGGFEFLA
RGTAVTMVAVVVARLLVTGLNRTLRRGLTMNRELAGNLPQLHTRAFHYLPIVQRIGKAII
WLVALGAALNGWGIDTLGMVETAAGRRIVGSTISIGLLLAGAIVAWEVVSALIEHFLRAT
DRNGTRIERSARMRTLLPLLRNAFLILLVTMVSLITLSELGVNIAPLLAGAGVVGLAIGF
GSQTLVKDIITGLFILFEDTVSVGDVVDVGGGHSGTVEAISIRSIRLRDGAGAVHSVPFS
AVTTVKNMSKDFSVTLFNITVSNREDPDRIIAALKETGAEVQAQPQFAADILTPLEVLGV
DKLSDTGINILAQFKTRPTRQWGVTREFNRLLKKKFDEQGISMPTQSMQLVVGQNPQDRA
LAEALSQGS