Protein Info for MPMX19_02432 in Azospirillum sp. SherDot2

Annotation: Cation/acetate symporter ActP

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 573 signal peptide" amino acids 1 to 29 (29 residues), see Phobius details transmembrane" amino acids 44 to 63 (20 residues), see Phobius details amino acids 84 to 107 (24 residues), see Phobius details amino acids 113 to 131 (19 residues), see Phobius details amino acids 157 to 177 (21 residues), see Phobius details amino acids 188 to 210 (23 residues), see Phobius details amino acids 219 to 240 (22 residues), see Phobius details amino acids 271 to 295 (25 residues), see Phobius details amino acids 307 to 334 (28 residues), see Phobius details amino acids 379 to 406 (28 residues), see Phobius details amino acids 428 to 447 (20 residues), see Phobius details amino acids 453 to 474 (22 residues), see Phobius details amino acids 485 to 504 (20 residues), see Phobius details amino acids 523 to 541 (19 residues), see Phobius details TIGR00813: transporter, solute:sodium symporter (SSS) family" amino acids 72 to 489 (418 residues), 196.8 bits, see alignment E=3.3e-62 PF00474: SSF" amino acids 72 to 492 (421 residues), 396.3 bits, see alignment E=7.8e-123

Best Hits

Swiss-Prot: 71% identical to ACTP_CITK8: Cation/acetate symporter ActP (actP) from Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)

KEGG orthology group: K14393, cation/acetate symporter (inferred from 92% identity to azl:AZL_001530)

Predicted SEED Role

"Acetate permease ActP (cation/acetate symporter)" in subsystem Pyruvate metabolism II: acetyl-CoA, acetogenesis from pyruvate

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (573 amino acids)

>MPMX19_02432 Cation/acetate symporter ActP (Azospirillum sp. SherDot2)
MRAIHSRIAAGMAAATGAALLLPTGAMADAIGGSVQKQATNWSAILMFLAFVLFTLGITY
WAARRTKSAKDFYAAGGGITGFQNGLAIAGDYMSAASFLGIAGLVYASGFDGLIYSVGWL
VGWPIVLFLIAERLRNLGKYTFADVASYRFQQTPIRTLSACGSLATVTFYLIAQMVGAGK
LIQLLFGLDYLVAVILVGVLMIGYVTFGGMLATTWVQIIKAVMLLSGASFMAFMILAKFG
FSPEAMFKAAVEIHPKGLAIMSPGTLVSDPISAISLGMALMFGTAGLPHILMRFFTVSDA
KEARKSVFYATGFIGYFYILTFIIGFGAILMILAPDANGAYPFLTAGPAAGAKAAITAII
GGTNMAAIHTAHAVGGDLFYGFISAVAFATILAVVAGLTLAGASAVSHDLYASVFAKGRA
NEADEIRVSKITTVVIGIVSIILGVAFENQNVAFMVGLAFVIAASANFPILLMSMFWGKM
TTRGAVMGGSLGLISAIVLLVLGPTVWKAVLGNPAAIFPYDNPGFFTIPLAFAGIWFFSI
TDNSAQAQKERKDFEAQYIRSQTGLGAEGASAH