Protein Info for MPMX19_02331 in Azospirillum sp. SherDot2

Annotation: putative transport protein HsrA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 483 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details transmembrane" amino acids 42 to 63 (22 residues), see Phobius details amino acids 70 to 91 (22 residues), see Phobius details amino acids 98 to 117 (20 residues), see Phobius details amino acids 130 to 152 (23 residues), see Phobius details amino acids 159 to 179 (21 residues), see Phobius details amino acids 191 to 210 (20 residues), see Phobius details amino acids 218 to 237 (20 residues), see Phobius details amino acids 258 to 279 (22 residues), see Phobius details amino acids 285 to 311 (27 residues), see Phobius details amino acids 323 to 342 (20 residues), see Phobius details amino acids 348 to 366 (19 residues), see Phobius details amino acids 388 to 411 (24 residues), see Phobius details amino acids 422 to 442 (21 residues), see Phobius details TIGR00711: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family" amino acids 9 to 409 (401 residues), 239.4 bits, see alignment E=3.8e-75 PF07690: MFS_1" amino acids 10 to 400 (391 residues), 160.5 bits, see alignment E=5.4e-51 PF06609: TRI12" amino acids 23 to 176 (154 residues), 32 bits, see alignment E=5.1e-12

Best Hits

Swiss-Prot: 39% identical to HSRA_ECOLI: Probable transport protein HsrA (hsrA) from Escherichia coli (strain K12)

KEGG orthology group: None (inferred from 93% identity to azl:AZL_002340)

Predicted SEED Role

"MFS permease"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (483 amino acids)

>MPMX19_02331 putative transport protein HsrA (Azospirillum sp. SherDot2)
MSRVTPLIIACALFMENLDSTVIATALPGIAQSMGEDPLRLSLAMTSYMLALAVFLPVSG
WAADRYGARTVFASAIGVFMAGSIACGLSNGLVELVAARILQGMGGAMMVPVGRLILLRT
VPKDQLVTAMARMTLPALIGPALGPLVGGAITTYASWRWIFFINVPIGLVGIALVLALIP
NLKDEQRDPFDALGFLWSSIALAAFMFGFENVGRDLLPAYAVAILLAVALLATLAYLRHA
RRVARPVLDPSLFRLQTYRASVLGGTLFRIGIGAVPFLMPVMLQIGFGLTAFESGALTFA
GAAGALTMKALAGPILRRFGFRPVLTLNSIVSGVILASYGAFRPDTPHLVILGALLLGGF
FRSLQFTGMNTLSYAEVPQPMTSRANTLASVMQQLSMSLGVAVGATTLHLTVQWSGTLTP
ASFAPAFLTVGLMACASSLPFWRLSADAGDEISGHIGRRGPDKPTGDARSATVKAAALTD
AAD