Protein Info for MPMX19_02104 in Azospirillum sp. SherDot2

Annotation: ATP synthase subunit delta

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00213: OSCP
  • amino acids 12 to 181 (170 residues), 166.8 bits, E=2.6e-53
• TIGR01145: ATP synthase F1, delta subunit
  • amino acids 12 to 179 (168 residues), 130.6 bits, E=3.7e-42

Best Hits

Swiss-Prot: 67% identical to ATPD_RHOCS: ATP synthase subunit delta (atpH) from Rhodospirillum centenum (strain ATCC 51521 / SW)

KEGG orthology group: K02113, F-type H+-transporting ATPase subunit delta [EC: 3.6.3.14] (inferred from 98% identity to azl:AZL_024950)

MetaCyc: 32% identical to ATP synthase F1, delta subunit (Synechococcus elongatus PCC 7942 = FACHB-805)
ATPSYN-RXN [EC: 7.1.2.2]

Predicted SEED Role

"ATP synthase delta chain (EC 3.6.3.14)" in subsystem F0F1-type ATP synthase (EC 3.6.3.14)

MetaCyc Pathways

• ATP biosynthesis (1/1 steps found)

KEGG Metabolic Maps

• Oxidative phosphorylation
• Photosynthesis

Isozymes

Compare fitness of predicted isozymes for: 3.6.3.14

Use Curated BLAST to search for 3.6.3.14 or 7.1.2.2

Protein Sequence (189 amino acids)

>MPMX19_02104 ATP synthase subunit delta (Azospirillum sp. SherDot2)
MASEGTGVSELAARYSIALFELADENQALDTVASDLTTLKQILAESADLRRLVRSPVISR
ADQGKAMAAVLDSAGVSDLTKRFIGLVAANRRLFSIDGMIEGFLAELARRRGEVTAQVTS
AQPLSDAQRNAVIDALKASIGSKVLVNTSVDPELIGGMIVKFGSRMVDTSVRTKLNKLQL
AMKASGGSV