Protein Info for MPMX19_02048 in Azospirillum sp. SherDot2

Annotation: Putative glutamine amidotransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 247 PF07722: Peptidase_C26" amino acids 50 to 206 (157 residues), 152.2 bits, see alignment E=1.9e-48 PF00117: GATase" amino acids 90 to 222 (133 residues), 48.9 bits, see alignment E=6.5e-17

Best Hits

KEGG orthology group: K07010, putative glutamine amidotransferase (inferred from 89% identity to azl:AZL_024470)

Predicted SEED Role

"Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)" in subsystem Chorismate: Intermediate for synthesis of PAPA antibiotics, PABA, anthranilate, 3-hydroxyanthranilate and more. or Folate Biosynthesis or Tryptophan synthesis (EC 2.6.1.85)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.6.1.85

Use Curated BLAST to search for 2.6.1.85

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (247 amino acids)

>MPMX19_02048 Putative glutamine amidotransferase (Azospirillum sp. SherDot2)
MAAIVGRSRPLVGITASIHGSRIAAMANRLALWRAGASSVRITAESPFPIDRLDALVVGG
GDDIDASLYGESARPHIRIDPERDRLEMLALDCAAKIGLPVLGICRGSQMINVHRGGSLH
VDIHEVYDEAPHMRTVLPRKRIRIAPDSRLYRILGIAECRVNALHHQSVDRVGDGLRVVA
RERAGVVQGIEAPNEPFMIGVQWHPEYLVADSRQQALFRRLVDTAAGTAPLDELVEVPSH
RSVRASG