Protein Info for MPMX19_02016 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 315 transmembrane" amino acids 6 to 22 (17 residues), see Phobius details amino acids 34 to 53 (20 residues), see Phobius details amino acids 65 to 88 (24 residues), see Phobius details amino acids 100 to 119 (20 residues), see Phobius details amino acids 125 to 146 (22 residues), see Phobius details amino acids 169 to 189 (21 residues), see Phobius details amino acids 198 to 219 (22 residues), see Phobius details amino acids 230 to 250 (21 residues), see Phobius details amino acids 259 to 279 (21 residues), see Phobius details amino acids 291 to 312 (22 residues), see Phobius details PF03547: Mem_trans" amino acids 8 to 305 (298 residues), 101 bits, see alignment E=2.8e-33

Best Hits

KEGG orthology group: K07088, (no description) (inferred from 93% identity to azl:AZL_024180)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (315 amino acids)

>MPMX19_02016 hypothetical protein (Azospirillum sp. SherDot2)
MNVVLNVAFPVFAIILAGFLSGKSKLLGAASSEALNKFVYWMALPPVLFLGTARRSIPEI
FNGPFIGAFLGSMLLVYALGAVIGRLVYRERTQIQCMQGLNSAFSNTGYMGIPLFLAAFG
PDRLAPTILATVIMSAIMVGIAVIWMEFANSQGSGLGKALRDVGRALAKNPLILSTAAGL
AWSALLPGVAVPKPIATFCELMGSPAGPCALFAIGLFLASQRLTAGLVEAGWISALKLLV
HPALAWVLTQTLFPMDPFWTGSAVILAALPTGALTFVVASQYQTYVERTSSAILVSTVLS
VVTLSALLAVYAPAG