Protein Info for MPMX19_01975 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 259 signal peptide" amino acids 1 to 35 (35 residues), see Phobius details PF18312: ScsC_N" amino acids 43 to 74 (32 residues), 51.9 bits, see alignment 1.2e-17 PF13462: Thioredoxin_4" amino acids 95 to 253 (159 residues), 72.8 bits, see alignment E=1e-23 PF13098: Thioredoxin_2" amino acids 105 to 249 (145 residues), 28.7 bits, see alignment E=3.5e-10 PF01323: DSBA" amino acids 109 to 249 (141 residues), 92.4 bits, see alignment E=8e-30 PF13743: Thioredoxin_5" amino acids 169 to 240 (72 residues), 36.6 bits, see alignment E=9.8e-13

Best Hits

KEGG orthology group: None (inferred from 93% identity to azl:AZL_023700)

Predicted SEED Role

"Protein-disulfide isomerase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (259 amino acids)

>MPMX19_01975 hypothetical protein (Azospirillum sp. SherDot2)
MRRLMRPALPFLRSALLALPVAALALSAAAPAHAQSASFDGNQKAAIEKIVRDYLMEHPE
VILQAVDAMQERQKTAEAEQARKALTENKQELLRNPADPVIGNPQGDVTVVEFFDYQCGY
CKAVQADTQSLIKGDPKLRFVLKEFPILGPASLVASKAALASRGQGKYVEFHNALMAQRG
QLDEAVIMRLAKSVGLDTDRLKKDMESPDVLKVIAANQALAEKLNIRGTPAFVFGDELVP
GAIKLDDMKRLTDAARAKG