Protein Info for MPMX19_01667 in Azospirillum sp. SherDot2

Annotation: putative amino-acid metabolite efflux pump

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 292 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details transmembrane" amino acids 33 to 51 (19 residues), see Phobius details amino acids 58 to 79 (22 residues), see Phobius details amino acids 86 to 107 (22 residues), see Phobius details amino acids 116 to 132 (17 residues), see Phobius details amino acids 139 to 157 (19 residues), see Phobius details amino acids 168 to 188 (21 residues), see Phobius details amino acids 202 to 224 (23 residues), see Phobius details amino acids 236 to 254 (19 residues), see Phobius details amino acids 260 to 277 (18 residues), see Phobius details PF00892: EamA" amino acids 8 to 129 (122 residues), 63.5 bits, see alignment E=1.3e-21 amino acids 142 to 277 (136 residues), 53 bits, see alignment E=2.4e-18

Best Hits

KEGG orthology group: None (inferred from 89% identity to azl:AZL_020700)

Predicted SEED Role

"Permease of the drug/metabolite transporter (DMT) superfamily" in subsystem Queuosine-Archaeosine Biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (292 amino acids)

>MPMX19_01667 putative amino-acid metabolite efflux pump (Azospirillum sp. SherDot2)
MSFAHTLQALAVMALWGLNFVVAKWALAEFPPLFVMFLRFALVAVLIIPFFRMPRDKLWK
IALLSVTLGSIHFPMMFSGLNGIDAATASLAAQVQVPFSSLLAALVFKDKLGWRRGIGMA
AAFAGVAVIAGEPRLGESLHSLLLILAASFAFAVASVQMKLIGAVNGFAVNGWMALFAMP
QLLVLSLLTEHGQMAALANSTWVGWASIAYMAVAVTIIAYGLWYPLLGRYSVNQTMPYLL
TVPVFGVASGVLLMGDPVTINLAIGGLLTIGGVAVIVKRRPRTVSETVTNPT