Protein Info for MPMX19_01646 in Azospirillum sp. SherDot2

Annotation: L-lactate transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 416 transmembrane" amino acids 12 to 32 (21 residues), see Phobius details amino acids 53 to 74 (22 residues), see Phobius details amino acids 81 to 102 (22 residues), see Phobius details amino acids 108 to 133 (26 residues), see Phobius details amino acids 142 to 163 (22 residues), see Phobius details amino acids 166 to 167 (2 residues), see Phobius details amino acids 170 to 193 (24 residues), see Phobius details amino acids 200 to 216 (17 residues), see Phobius details amino acids 227 to 248 (22 residues), see Phobius details amino acids 261 to 284 (24 residues), see Phobius details amino acids 304 to 330 (27 residues), see Phobius details amino acids 350 to 371 (22 residues), see Phobius details amino acids 382 to 401 (20 residues), see Phobius details PF07690: MFS_1" amino acids 23 to 366 (344 residues), 109.3 bits, see alignment E=1e-35

Best Hits

KEGG orthology group: None (inferred from 97% identity to azl:AZL_020020)

Predicted SEED Role

"major facilitator superfamily MFS_1"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (416 amino acids)

>MPMX19_01646 L-lactate transporter (Azospirillum sp. SherDot2)
MTTVTPAPAPSWRTPALVVVCGCLISMLAFGPRSSMGLFIGPLSETRGWGRDVFALAMAI
QNILWGAGGPFAGALTDRYGPAPVLAGGGILYAAGLALMPYATTSVELYLTAGVLIGLGL
SGASFGIIIAGFTRLLPPEQRSWSVGIATAAGSMGQFLFAPMGQAFIAGFGWQTALLLLA
ASMIAVPLLAGVFPGPKGMTASGTPAVTGANIGYIAAVRQAFQHRSYVLLVAGFFVCGFQ
LAFITTHLPPYLTAAGISPTLAAWALALIGLFNVIGSYASGILAGKVSKRYLLCANYFSR
GIATAIFILLPISSVTVIAYAAVMGLLWLSTVPPTSGLVALMFGTRYMGTLYGFAFFSHQ
VGGFLGVWLGGVLYERTGSYDVVWWLGVALAMFATIVHWPIAEKPAPSLAAAEAKA