Protein Info for MPMX19_01531 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 192 transmembrane" amino acids 19 to 40 (22 residues), see Phobius details amino acids 52 to 78 (27 residues), see Phobius details amino acids 108 to 116 (9 residues), see Phobius details amino acids 135 to 159 (25 residues), see Phobius details amino acids 171 to 189 (19 residues), see Phobius details PF09335: VTT_dom" amino acids 58 to 154 (97 residues), 40.9 bits, see alignment E=1.3e-14

Best Hits

Swiss-Prot: 31% identical to Y703_HISSO: Uncharacterized protein HI0703 homolog from Histophilus somni

KEGG orthology group: None (inferred from 96% identity to azl:AZL_018740)

Predicted SEED Role

"FIG139438: lipoprotein B"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (192 amino acids)

>MPMX19_01531 hypothetical protein (Azospirillum sp. SherDot2)
MLRSLYTRLQRLSARDDAVWWMSAISFAESSFFPLPPDVMLVPMCLEKPKRLWFYTNICA
FASLLGGMLGYALGFYLFESVGRMIIDFYNAQESFQHFQGMFSEFGPWFLILKGVTPIPY
KLLTITAGFAHLDLTVFILCSIVARFSRFYMIAILLHFYGPQVQHIIEKRLMLVATVLLV
VVVGGLLSFKFV