Protein Info for MPMX19_01520 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1168 PF04851: ResIII" amino acids 698 to 854 (157 residues), 26.8 bits, see alignment E=9e-10 PF00176: SNF2-rel_dom" amino acids 702 to 984 (283 residues), 247.8 bits, see alignment E=2.6e-77 PF00270: DEAD" amino acids 722 to 856 (135 residues), 32.9 bits, see alignment E=1e-11 PF00271: Helicase_C" amino acids 1000 to 1109 (110 residues), 75.1 bits, see alignment E=1e-24

Best Hits

KEGG orthology group: None (inferred from 91% identity to azl:AZL_018660)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1168 amino acids)

>MPMX19_01520 hypothetical protein (Azospirillum sp. SherDot2)
MSLFDALPRGPSSGGAAVPFGQDDLTRVFDAKTLQRGRTLMMTGAVTLGAPGSDRIEAEV
SDLGRRLSVTVTPVQGKRSVVLDRTCSCGRNACAHMAAAAMLALESRPEWRRASLFDVAD
VKAPLAPPPPPPVPVASPPVATAAVQPSAPPPVPPAAPKPPLTLVRPPVAPPVRSVAPPP
PPPPPAPKPEPERSLRWILEPGQGDVACYILAEFVAEGSADSSPATPRDVLAKAPRSLDG
DADRAIARLLGGGGTERTPVAKSRGEAVDRLLRRLLSTGRLRWRDGTPLAEAPGRTVRTF
RDPATRKLRPTGLPERSVLVKGQSYWCVDSATGTVFPVDLQVVEVPKAKPVPPAPPPPVP
SKANPSRLFGPSRSGVALMPRIAPPPPSISTPSFRDSGIPGVRSGAAEAAAIVERSPRII
ARLGRVVTPADGLVDVLRLSFDYGEPDNAVEIEPDDQRQFARYEDEFNEVIFVRRDKADE
QAALDRLSGLGFAQARIEPPKGALNARGSRVHWLTGRDVEERWQYFLTNEVPALTKAGWI
MEVGADFGTKVIEPGAEVEVAVRDAGDGWFDLDVGVEIDGERQPLLPILARLVEKGGLSS
TRIIDGRAHIVLDDGNVLALPAERIERLLSVLEAMLDSGRSSGDRLKVPLAEADSLLDID
DLIARRGDETAQIDGYLQRLRADEMPGDMTPPPGFKGELRDYQRGGLAWMQSLRANNVAG
ILADDMGLGKTAQTLAHIAMEEHEGRLTEPCLVVVPTSLVPNWVAESERFTPHLRVVVLH
GIDRHGKLSEIDRAHIVVTTYGVVARDVDLLKRLTWHMIVLDEAQAIKNPDGKATRAVAA
LPARHRLCLSGTPVENNLGELWSQFAFLMPGLLGDRKEFGKRYRVPIEKRGDNTRANLLM
RRIRPFLLRRTKEAVAKELPPKTEVVVRIDLERDQRDLYETIRLSVNETVRAALAASGKG
LGQNAIAVIDALLKLRQVCCDPRLLKSIAALGGKARPSAKLHALTEMVKEMVPEGRRILI
FSQFTSMLDLIKLELEKASIPYVELTGRTLDRAEPVNRFQNREVPVFLISLKAGGRGLNL
TAADTVIHYDPWWNPAAEDQATDRAYRIGQDKPVFVYKLIAANTVEERILDLQRRKGSLS
DATIEGKGLVSALDGGDIDYLLGDGDEE