Protein Info for MPMX19_01516 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 413 transmembrane" amino acids 21 to 44 (24 residues), see Phobius details amino acids 56 to 76 (21 residues), see Phobius details amino acids 83 to 102 (20 residues), see Phobius details amino acids 108 to 131 (24 residues), see Phobius details amino acids 143 to 166 (24 residues), see Phobius details amino acids 172 to 195 (24 residues), see Phobius details amino acids 216 to 236 (21 residues), see Phobius details amino acids 248 to 268 (21 residues), see Phobius details amino acids 288 to 307 (20 residues), see Phobius details amino acids 312 to 333 (22 residues), see Phobius details amino acids 346 to 368 (23 residues), see Phobius details amino acids 374 to 395 (22 residues), see Phobius details PF07690: MFS_1" amino acids 24 to 264 (241 residues), 90.9 bits, see alignment E=4.1e-30 amino acids 258 to 405 (148 residues), 56.6 bits, see alignment E=1.1e-19

Best Hits

KEGG orthology group: None (inferred from 94% identity to azl:AZL_018570)

Predicted SEED Role

"Nitrate/nitrite transporter" in subsystem Nitrate and nitrite ammonification

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (413 amino acids)

>MPMX19_01516 hypothetical protein (Azospirillum sp. SherDot2)
MSHPSASAALPSPTSARLSVGFAWVGHSLMHIVSALFLTIVLALETEWKLSYDELIRLWT
LGAFMIGLGAPLAGWLGDRWSSAGMIAVFYLMTGGGAVLAGFSDGPEMLMWSLALLGLGA
SIYHPVGMAWMMANAENRGKAMGWLGLFGTFGVATAAVVAGSLTQWLNWRMAFIIPGAIC
LVLGVLLALLMMTGVVQDRHADVKPQPKPSRGDVVRAFFVLSLTMVCAGLIFNAMQVVLP
KMFEARLGGWLGSGTLGVGGLVTAVYLISALPQMIGGVLADRHSLKRVYVLCLLAQIPLM
AAVAVLAELPLVAAAAFVVIASQTQIPAENMLLARYTPDKHRGLAYGAKYILSFGAGPLA
VQLVAWVYERTGDFTMLYLTLSALAALAFAAALLLPDDRRKAEPVAEPLPAAE