Protein Info for MPMX19_01472 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 395 transmembrane" amino acids 30 to 48 (19 residues), see Phobius details amino acids 56 to 76 (21 residues), see Phobius details amino acids 96 to 115 (20 residues), see Phobius details amino acids 157 to 175 (19 residues), see Phobius details amino acids 180 to 197 (18 residues), see Phobius details amino acids 209 to 228 (20 residues), see Phobius details amino acids 243 to 264 (22 residues), see Phobius details amino acids 291 to 312 (22 residues), see Phobius details amino acids 328 to 348 (21 residues), see Phobius details amino acids 354 to 376 (23 residues), see Phobius details PF10129: OpgC_C" amino acids 21 to 377 (357 residues), 424.3 bits, see alignment E=1.9e-131

Best Hits

KEGG orthology group: None (inferred from 90% identity to azl:AZL_018220)

Predicted SEED Role

"OpgC protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (395 amino acids)

>MPMX19_01472 hypothetical protein (Azospirillum sp. SherDot2)
MKGAAMREGTATESGNETAARDLRLDFFRGLALWFIFVNHIPANQISWATPRNFGLSDAT
EIFVFISGYTAALVYGRTLDRQGMPMAAAQVLHRCWTLYATYIILFFAYTAQIAYTARAF
DSPLFAEEMGIAGYFQDPVTALTQAILLKFRPANLDVLPLYIVLLLAMALLLPALRRRPL
GVLAGSAALYLAARQWGWNLPTYPDGGVWYFNPFTWQFLFVLGASLQFQPDLRTTLTRFR
RPVAAAAGAVLLASLFLTLSWKFAPLHALIPVWLTEILYPISKTDLDPLRLLHFFALAYL
VLWLVPAGASWLRGPLATPLLACGKQSLHVFCLGVLLSFAGQTVLVHVSGSLSAQFLVTV
LGIAMMVLMARFLNWYQSAERARRHRVAATTKMGT