Protein Info for MPMX19_01432 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1171 transmembrane" amino acids 717 to 737 (21 residues), see Phobius details PF02775: TPP_enzyme_C" amino acids 451 to 600 (150 residues), 28.9 bits, see alignment E=1.3e-10 PF01558: POR" amino acids 724 to 912 (189 residues), 74.2 bits, see alignment E=2.2e-24 PF20169: DUF6537" amino acids 952 to 1150 (199 residues), 232.4 bits, see alignment E=7.6e-73

Best Hits

KEGG orthology group: K04090, indolepyruvate ferredoxin oxidoreductase [EC: 1.2.7.8] (inferred from 92% identity to azl:AZL_017580)

Predicted SEED Role

"Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits" in subsystem Aromatic amino acid interconversions with aryl acids

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.2.7.8

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1171 amino acids)

>MPMX19_01432 hypothetical protein (Azospirillum sp. SherDot2)
MALATVSLEDKYALEQGRVYLTGTQALVRLPMMQRQRDLAAGLNTGCFISGYRGSPLGGF
DQNLWNARKFLEKNHIQFQPGVNEELGATAVWGSQQVGMFKGAKYDGVFAMWYGKGPGVD
RSGDVFKHANAAGTSKNGGVLVLTGDDHNCKSSTFPHQSEHAYMHSMIPVLNPSGVQEIL
DYGLIGWQMSRFSGCWIAMKTIAETVDTSASVYIDPHRVSPIVPADFALPPGGLNIRWPD
PPLEQEYRLMKHKLYAALAFARANKLDKVVMESPRPRFGIVTTGKSYLDVRQAFDELGIT
EEMAADWGITVYKVGMPWPLERDGVRHFAEGLEEIVVVEEKRAVIENQLKEQLYNWNPDV
RPKVVGKFDEQGEWILPSAGELTPAQIAVVIGRRLQRFIENENLARRIAFLDAQEKQKAH
VARVVRKPTFCSGCPHNTSTVVPEGSRALGGIGCHYMATWLDRSTDTFTQMGGEGVPWVG
QAAFTDEKHIFANLGDGTYFHSGVLAIRQAIAAKVNITYKILFNDAVAMTGGQPFDGSLT
VQSIAHVLRAEGVQRITVVSDEPEKYGIGNGLPQFTTVEHRDDLDRVQKEMREVPGVSVL
IYDQTCATEKRRRRKRGKMVDPAKRVVINELVCEGCGDCSAKSSCVSVIPQETEFGRKRQ
IDQSSCNKDYSCTKGFCPSFVTVEGGSLRKPKPAAAKSADATALPAPALPTIDKTWSLYV
TGVGGTGVVTIGALLGMAAHIEGKGVGVLDMTGLAQKGGAVTSHIRIANTPEDIHSVRIA
AGGADAVLGCDLIVAAAGDGLSKMTAGRTRAVINTHDSITADFIKKPDMVIPVRDLVGDI
RKACGGETNIDAFDATKLATALLGDSIYANPFLMGYAWQKGLIPLSEESIVKAIELNGVS
VKLNLDAFQWGRRAAVDLAAVEAAVTKSSGPQEVAQTAQSLLLDQRRQSGSLDEVIERRH
RFLVDYQDAAYAARYHALIDWTRRTEQQKVPGSTVLTEAVARAHFKLMAYKDEYEVARLY
TDSGFVENVQRMFEGDWKLTFHMAPPVMGETAEDGAEPKKKSFGPWMLPVLRLLAKGKRL
RGTRLDPFGRTAERRQERQLIADYEAVVGELLNGLTREKLDLAVEIAKLPMEMRGYGPVK
VRNVTAAKAKEARLLADFRAPVATPQPLAAE