Protein Info for MPMX19_01397 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 228 PF00353: HemolysinCabind" amino acids 24 to 58 (35 residues), 34.3 bits, see alignment 9.1e-13 amino acids 51 to 85 (35 residues), 35.4 bits, see alignment 4.1e-13 amino acids 78 to 106 (29 residues), 25.6 bits, see alignment 5e-10 amino acids 111 to 128 (18 residues), 16.6 bits, see alignment (E = 3.1e-07)

Best Hits

Predicted SEED Role

"Alkaline phosphatase (EC 3.1.3.1)" in subsystem Phosphate metabolism (EC 3.1.3.1)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.1.3.1

Use Curated BLAST to search for 3.1.3.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (228 amino acids)

>MPMX19_01397 hypothetical protein (Azospirillum sp. SherDot2)
MPTYNGNQNSETFGPFNVAVTVNAGGGDDIVFGSPYNDVLNGDDGNDSMKGGQGNDSLAG
GAGNDLLFGEDQDDLIIGHDGSDTLIGGNNNDTLYGGTGNDLLIGDQPTESGIDWLIGNQ
GDDTLIGGNYSDNYVYDFSQNDGFDTIFDFSGSDDTLYLNGINISDVRFSHGSGTYSNDL
IIYSSSDYQADGILSGAVTVANFYGAANGDPQGVVEYLGVGGSLYRIG