Protein Info for MPMX19_01379 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 557 transmembrane" amino acids 24 to 48 (25 residues), see Phobius details amino acids 68 to 92 (25 residues), see Phobius details amino acids 104 to 124 (21 residues), see Phobius details amino acids 155 to 174 (20 residues), see Phobius details amino acids 213 to 235 (23 residues), see Phobius details amino acids 255 to 274 (20 residues), see Phobius details amino acids 305 to 330 (26 residues), see Phobius details amino acids 349 to 369 (21 residues), see Phobius details amino acids 387 to 407 (21 residues), see Phobius details amino acids 414 to 438 (25 residues), see Phobius details amino acids 476 to 493 (18 residues), see Phobius details amino acids 526 to 545 (20 residues), see Phobius details PF00528: BPD_transp_1" amino acids 85 to 272 (188 residues), 49 bits, see alignment E=3.2e-17 amino acids 384 to 528 (145 residues), 26.4 bits, see alignment E=2.7e-10

Best Hits

KEGG orthology group: K02011, iron(III) transport system permease protein (inferred from 95% identity to azl:AZL_012500)

Predicted SEED Role

"Ferric iron ABC transporter, permease protein" in subsystem Campylobacter Iron Metabolism or Iron acquisition in Vibrio or Transport of Iron

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (557 amino acids)

>MPMX19_01379 hypothetical protein (Azospirillum sp. SherDot2)
MAMATDAKSPGSPSFSPRQLWARIGPTGLFALILALLIALPILAVFVQSAGVSTDLWGHM
ARTVLPGYILNTVILLGIVGVVTLVTGVACAWTVTMHDFRGRGVLQWLLLLPLAMPAYVL
AYTYTDFLQFAGPLQSFLRTTFGWRRGDYWFPDIHTAWGAGLVLSSVLYPYVYVLTRAAF
LEQSVCVLEASRTLGCSAFGAFRRVALPLARPALVAGVGYALMETLADFGAVRYFGIDTF
TVGIYRTWFALGDPAAAAQLAAVLLLVVLALVGLERLSRGKMRFHQTTGRYRALPAPRLS
ARGTVIAWIVCLTPVLFGFLLPGAVLIRMILRGGTELTLARFTDLTVNTFILGASGAVLV
VAVALMVIHGVRHDRSGFATGAARLASLGYATPGTVIAVGILITVGLTRDWTGWPMGAIL
GTTIAGILYGYLIRFFVVAYGPLESGFAKIGPNLEGAARSLGHTPLQVLRRVHLPLLRPS
LLSAAMLVFVDITKELPATMILRPFNFDTLAIEAFRMASTERLDDAALPALVIVLVGLAP
VIYLSRTIAASRPGHRD