Protein Info for MPMX19_01376 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1454 signal peptide" amino acids 1 to 35 (35 residues), see Phobius details PF04357: TamB" amino acids 1091 to 1454 (364 residues), 194.3 bits, see alignment E=2e-61

Best Hits

KEGG orthology group: K09800, hypothetical protein (inferred from 86% identity to azl:AZL_012530)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1454 amino acids)

>MPMX19_01376 hypothetical protein (Azospirillum sp. SherDot2)
MVLVKGHGVTAVRLFLVGLTILAGLLAGPQPARAFSLFAGDTARDWLVEKIEGAVESPDM
HLKLGAIEGSIPTDFTIATVTLADSQGVWLTIDRLHVVMSPSALFLRSARIDALEAASVV
VTRAPVSTQPAAPSDPNAPLLPSLPVDIDLKKLVVERLELAPALLGEPAVLRIAGALALE
HSGGALNTNLSVARIDDKPGKADLLAIFDPGKNTLNLSVDASEPAGGVMARALSIPGLPP
IELALKGDGTLDDWTGKLTAMAGEAASPSGTLNADATIKKGPEGHALTLAAGGNFAPLIA
GLAGDTVVPLIGPNPTLNATVLRAPSGAISLRPLALTVAAANATVNGDVAADYKSLTLRW
TLQAGPDSTLHPLVPLSWREGVVEGSAEGTMSALNVAVNATLRDLAADDPALSHLTGPET
NLAAKAQIDTGSGRIGLETLALTAAAARAEAKGTVGGWGQTVDLTLSANADDLAPLSGLA
GRPLAGAVALAGPVKRGADGTLTADLTGSLDRLSTGTPADAVLGDKATLKLAARMEPDGA
MRLTDLTVDGRNGKLTGNAALADNKVDARTTLTVAKLEPLGGALGTPMEGAATLEATARG
PLDAIEAQATLNARDLVVQGRRLGATEVKATAAGLPATPNGTVSARTNLDKTPLSVDGRY
ALREQTLRLDGLTVANGANRITGQAQVALDTLLATGRLEGKLPNLNGLSALAGMPLGGGA
SFTLALDGKGGKQAANLTADASDLRVEGQGEGGGGPLLTARRLTAKADVADALGTPSGKT
RVEMTDGNAAGTELRSVTASVDGSLAKAGFQATAAGAGAQPVALDLAGNLTQEGQVTRIR
LDRLQARYAGEDLRTTAPATILLADRRYEVKELRLSSGNARLAADLGLNGDRLSGELTID
RLPLALAKLASPTLALDGVANARASLGGTLRNPRADATLRVSGLKVQQTTQAGLPGIDAT
LDAQWRDRRLSLNGRIAMPKNAGTLTASAALPLVMNPDSYAVSVPPNGALEAAVNGTVDL
SLANDLLAASGDRARGSLRLDVRAGGTVGKPALGGSVVLANGRYENRASGAVITNIEARL
AGDGDVFTIQSFRGRTRNGGAISASGVIRPGAPADRQLDIALQADNARLVEIDLVTAEIG
ANLTLTGGFANARLAGPVDIRRAEIQVPDRMPANVVDLKVTEVGKGRRARGTTQVSTAGG
TRRVPQPAETPPAATTFVLALDMTVNAPNQIFVRGRGLDAELAGNLRVKGTAAAPEVTGR
FNILKGSLNLLAKNFEFKRGIFDFDGTQPIDPRLDLLAEATANGITADVVVSGTARQPKI
ELTSPQGLPQDEVLAGVLFGKSVGDLSAAEAVQLAQSAAALAGVGGGGGGILDTVRRSLG
VDRLDFTQGENGKGGAVQAGRYVSDRVYVGVEQGIGANQSRAKVEVDITKNLKGTASVGA
NSETKFGVVYEKDY