Protein Info for MPMX19_01293 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 405 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details transmembrane" amino acids 36 to 56 (21 residues), see Phobius details amino acids 68 to 89 (22 residues), see Phobius details amino acids 98 to 117 (20 residues), see Phobius details amino acids 124 to 144 (21 residues), see Phobius details amino acids 164 to 188 (25 residues), see Phobius details amino acids 195 to 214 (20 residues), see Phobius details amino acids 220 to 237 (18 residues), see Phobius details amino acids 244 to 266 (23 residues), see Phobius details amino acids 326 to 349 (24 residues), see Phobius details amino acids 361 to 383 (23 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 75% identity to azl:AZL_013200)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (405 amino acids)

>MPMX19_01293 hypothetical protein (Azospirillum sp. SherDot2)
MTVAAARMGALSMAAALLLYGGLSVPAPPALRGVELSIGLLMLLSIGWKWPLAVASGHAL
RTSPDREWMPVAVSAFAWLLWVPLLRGAALGWDAVDILRDVVPLLYLFLPVLLVPALRAA
GRIAVCALAGGLGIAGLLLALRWWRQADWGFGAIGQRAMADGGAYLLNAPAVLFAAVVLP
AMALSLIGIGGRFRWWLAAIPCAVGGALCLAALAGAVHRTALGLALLSLALIALWWARRQ
AWLALPLLIGLGLAAAVGGDALVGAWQQAAEKTRLTGINARWEEAVAVIEHAVASPWSLL
FGDGWGARIANPAVGGWRVSYTHTLASYSLLKAGLCGMVALAAYLGALVRPWCGLLAADP
PLALAVVPPLAMALCLHTSFKYLDTGVILSLMLLAAECRKGLSDS