Protein Info for MPMX19_01254 in Azospirillum sp. SherDot2

Annotation: 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 346 signal peptide" amino acids 1 to 29 (29 residues), see Phobius details transmembrane" amino acids 318 to 339 (22 residues), see Phobius details PF00106: adh_short" amino acids 12 to 201 (190 residues), 185 bits, see alignment E=1.7e-58 PF08659: KR" amino acids 14 to 177 (164 residues), 53.6 bits, see alignment E=4.1e-18 PF13561: adh_short_C2" amino acids 18 to 232 (215 residues), 132 bits, see alignment E=4.2e-42

Best Hits

KEGG orthology group: None (inferred from 82% identity to azl:AZL_013560)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (346 amino acids)

>MPMX19_01254 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase (Azospirillum sp. SherDot2)
MAKRPGSDMSDKVVVITGASSGIGRATALEFASQGAAVILAARRMAALHEVAEECIEAGG
RAMVVPTDVTDQRAMQALADRAIQAFGGIDVWVNNAGVIAFGRFEDIPDEVFEQVVRTDF
FGMVHGCRAVLPHFLDRGEGIVINTASMVSNIGQRYATPYTAAKFAVRGFSESLRQELVD
EPDIHVCMVMPASIDTPLWQHAANYTGRAIKPLNPIHPPEEVAAAILSLAANPQRELFVG
AEGRLAAVGNAMAPQMTERALAHTIERDMFQNRSAPDTSGGVLTAMPEYQGASGGWMERQ
PEHGRGRGRGREEGRGRAFSWTNLTLFLLPVVLASRPLAGRAMRHM