Protein Info for MPMX19_01187 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1117 PF08379: Bact_transglu_N" amino acids 6 to 84 (79 residues), 90 bits, see alignment 2e-29 PF01841: Transglut_core" amino acids 136 to 246 (111 residues), 63.9 bits, see alignment E=2.5e-21 PF09899: DUF2126" amino acids 276 to 1115 (840 residues), 1391.9 bits, see alignment E=0

Best Hits

Predicted SEED Role

"Large protein containing transglutaminase-like domain"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1117 amino acids)

>MPMX19_01187 hypothetical protein (Azospirillum sp. SherDot2)
MAIHVALNHKTIYRYDRPVSLGPQIIRLRPAPHCRTPILSYSLKVTPKQHFLNWQQDPQS
NFQARFVFPEKTREFVVEVDLVAEIAAINPFDFFLEEKASHIPFAYEDWLQRELRPYLET
EEPGPELAAYLTDIPRDKTPTIDFLVAVNQRLQQDIGYVIRLEPGIQSCEETLTKRTGSC
RDSAWLLVQILRHLGLATRFVSGYLIQLTADQKALDGPSGPESDFTDLHAWVEVFLPGAG
WVGLDPTSGLLAGEGHIPLACTPDASSAAPISGLVDEAEVEFGHEMSVTRIYEAPRVTKP
YNPQQWAAIEALGHRVDEDLKAEDVRLTMGGEPTFVSIDDMDGAEWNTTALGPQKRRMAA
DLIHRLMARFAPGGLLHFGQGKWYPGESLPRWAMTVYWRRDGGALWANSDLLAREDTDYG
HTAQDAGVFLMALAKRLGLDPNLVLGAYEDPWHYLRKESQLPINVDPLNSKLEDKEERER
LTRVFTRGLAEPVGFVMPINRRMTQQGPVWLSSTWPLRQEKLLLIPGDSPVGYRLPLGSL
PWVSKSDYPYAWETDPFEDRGPLPPHPVQRRQEIRGAVQESDRGVHTDKRIAQRQRIMAE
IRDELPEDGKSAWWVVRTALSCEARNGRLHLFMPPMSTLEDYLAMLAEIEATAVELEMPV
VIEGYQPPKDPRLNSLAVTPDPGVIEVNIHPAHSWDDLVRNTITLYEDARQSRLGAEKFM
IDGRHCGTGGGNHVVMGGATAADSPFLRRPDLLRSLITYWQNHPALSYVFSGLFIGPTSQ
APRVDEARDDQLYELEIAFNQIDQAAASGNCPPWLVDRVLRNLLVDVQGNTHRAEFCIDK
LYSPDSSTGRLGLVEFRAFEMPPHAEMSLTQQLLMRALVARFWKHPYKGRLVRWGTDLHD
RFMLPHFLQQDMADVLQDLRDHGYPLEDSWFAPHFNFRFPVYGHVNQRGITMELRMALEP
WHVLGEEPGGGGTVRYVDSSVERVQVRVSGLIDARHVITCNGRRVPLIPTGVEGEFVGGV
RYRAWQPPSCLHPTIPVHTPLIFDILDSWAGRSIGGCTYHVMHPGGRNYETFPVNANEAE
GRRLARFFPFGHTPGPMDSPAEERNPQFPMTLDLRRG