Protein Info for MPMX19_00985 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

No protein families (PFam or TIGRFam), signal peptides, or transmembrane helices were found in this protein.

Best Hits

KEGG orthology group: None (inferred from 97% identity to azl:AZL_016290)

Predicted SEED Role

"Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1)" (TC 3.A.5.1.1)

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (428 amino acids)

>MPMX19_00985 hypothetical protein (Azospirillum sp. SherDot2)
MSKFGGRPPIGRDRVRLSTTEKQAAVAAAKDQKPDFDNDKLLNLLRSAKNELQGMRLIHM
HLSLLKDRDPSSQMMVRSIIQELGTKASYLQSFNISNGDVIILYKGLKLTGVTDVCQTVE
QVFLSKTTLTGPNPYKEYSLYSIMELALNFINVIRFIEELQASETGNHVTETKPPITLEE
LGKLERSMQMFDLSPFLFNQGIANIGSGEAEMEYFELYISIKLLQERLCPDYDITANKWL
FNYFTANLDQSVLRALNHGLSFMRGRRIGININLSTVISTGFVKFDERLPIDFRGQVVLE
VSKGDLIENLSLFNEVVEFAQDRRYQIAVDGLNPFWVTNFDLEYLNADYAKIFWSNDMLE
MDPSFEKYFRDRIAEQDRCKFILARCDSVTSLVYAHKMGINLVQGRAVDNIMRKGVSVRE
AIAHAKVD