Protein Info for MPMX19_00933 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 319 transmembrane" amino acids 16 to 39 (24 residues), see Phobius details amino acids 46 to 69 (24 residues), see Phobius details amino acids 75 to 94 (20 residues), see Phobius details amino acids 115 to 135 (21 residues), see Phobius details amino acids 170 to 194 (25 residues), see Phobius details amino acids 215 to 235 (21 residues), see Phobius details amino acids 241 to 265 (25 residues), see Phobius details amino acids 274 to 299 (26 residues), see Phobius details PF09991: DUF2232" amino acids 173 to 299 (127 residues), 32 bits, see alignment E=3.9e-12

Best Hits

KEGG orthology group: None (inferred from 96% identity to azl:AZL_016790)

Predicted SEED Role

"FIG003573: hypothetical protein" in subsystem CBSS-262719.3.peg.410

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (319 amino acids)

>MPMX19_00933 hypothetical protein (Azospirillum sp. SherDot2)
MALGPAVPLVVAVGGGLASAFFYLSVTFGGMGALILGYLAPLPLFLTGLWLGAPVVALAG
LAGAAAVLLGTSGSMLVALSYLVTGAAPAILVVRQSLLARSREDGSLEWYPPGRVLMGLT
GMGVAALLAAVILTLGEPGGLEGLMRQTLARVVEPAFRSQGQPAPDPEAFWVAAVLPGLV
AVSWLVMTIVNAVLAQGALMRFGRNRRPAMRLAELELPGWLAPLFAVSVAAASAVPGTVG
FLAVNLALILAIPFAFAGLSVVHVFASSKSARTLILVGFYMMLFLFGWPILLLVGLGMIE
QWIGLRRRFSPAAPGQEDE