Protein Info for MPMX19_00915 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 396 PF05762: VWA_CoxE" amino acids 188 to 278 (91 residues), 31.1 bits, see alignment E=8e-12

Best Hits

KEGG orthology group: K09989, hypothetical protein (inferred from 94% identity to azl:AZL_016960)

Predicted SEED Role

"Thioredoxin reductase (EC 1.8.1.9)" in subsystem Glycine reductase, sarcosine reductase and betaine reductase or Thioredoxin-disulfide reductase or Wyeosine-MimG Biosynthesis (EC 1.8.1.9)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.8.1.9

Use Curated BLAST to search for 1.8.1.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (396 amino acids)

>MPMX19_00915 hypothetical protein (Azospirillum sp. SherDot2)
MFTSFFFDLRKAGVPVSLTEYLTLMEAMKQGTASFRVEDFYYLSRACLVKDERNLDRFDR
VFGATFKGLTDEMPAGEEVPVTDLPEEWLRKLAERFLTDEEKAQVQALGGWDKLMETLAQ
RLAEQKGRHQGGSKWIGTAGTSPFGAYGYNPEGVRIGQHESRHRRAVKVWDRREFRNLDD
RVEIGTRNIKVALRRLRKFARSGAASELDLPGTIRATANNAGWLDLKMVPERHNTIKVLL
FLDIGGSMDDHIRLVEELFSAARSEFKHLEHFYFHNCVYEGVWRDNARRHTERLSTWDVL
HTYPADYKLVFVGDAAMSPYEIVYPGGSVEHWNEEAGQVWMQRLLSVYAKAVWLNPTAPQ
YWDYSESTRLLQRLMGGRMFPLTLEGLDGAMRELGR