Protein Info for MPMX19_00900 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 723 PF13188: PAS_8" amino acids 157 to 210 (54 residues), 31.2 bits, see alignment 4.6e-11 PF00989: PAS" amino acids 158 to 269 (112 residues), 56 bits, see alignment E=1.1e-18 TIGR00229: PAS domain S-box protein" amino acids 159 to 278 (120 residues), 89.4 bits, see alignment E=2e-29 PF08448: PAS_4" amino acids 162 to 272 (111 residues), 33.5 bits, see alignment E=1.3e-11 PF13426: PAS_9" amino acids 167 to 271 (105 residues), 44 bits, see alignment E=6.8e-15 TIGR00254: diguanylate cyclase (GGDEF) domain" amino acids 282 to 451 (170 residues), 57.4 bits, see alignment E=1.5e-19 PF00990: GGDEF" amino acids 283 to 449 (167 residues), 65.8 bits, see alignment E=1.3e-21 PF00563: EAL" amino acids 472 to 704 (233 residues), 230 bits, see alignment E=8e-72

Best Hits

KEGG orthology group: None (inferred from 86% identity to azl:AZL_012420)

Predicted SEED Role

"diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)" in subsystem Bacterial hemoglobins

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (723 amino acids)

>MPMX19_00900 hypothetical protein (Azospirillum sp. SherDot2)
MNGSECSGSGAAEAAGMPRDPAFLASLAASLLDDGGMALVYLDRDRVCRHADRHFAAALD
RSPAELVGRPLAAIDHPVTAALGAAIAAITSLGQSQAHGSAPVDCPTVGCDGRRSILSGS
VTAHRDGAGTILGYLGNFHQTGDPDRIAEFVTCRDAFVATLLDAAVDGIIVSDRSGTIRS
INRACCRLFGYEDSELVGRSMTILMPPPFSRDHTRYVDTYMRTERAKIIGIGRDTLGQRK
DGTVFPIHLSVGEARMGDDVTFVGIIRDISDRLAAEQRASYLARHDPLTGVLTRTAFLEE
CEALFAGHRADGPEGSDSGGAGGGLFALFALDVDQFSDVNEAFGFHVGDAALKAMVSRVT
EVLPPNTIICRIAADEFAALSRVADADQARTLAGVLHDRLTASIYADRHWVRLRLSVGAA
VQDETVSTLEDLNAKAKLALQAVQHNGGNAICFYTPEMAAAATRRMMLTMHLTHAIERNE
LRLVYQPIVDKAGRVRSAEALLRWDHHALGPVSPGEFIPVAEESGLIVPITDWVLSTAIA
QMTAWEAEGVLPDRVFLNISGQQFLRGNLTLRLEELLCEHPSLRSHLGLEITEQAAVRDL
KVAVRTLGELADLGIQAAIDDFGSGYSSLSYVQQLPVAKLKIDRAFVIDVPENPKSNALV
RAAVGMAHGLGLTTVAEGVETAEQRDFLVSVGCDLMQGYLFGRPMAPEALADMVRIQAAP
AIA