Protein Info for MPMX19_00844 in Azospirillum sp. SherDot2

Annotation: GTPase Era

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 394 TIGR00231: small GTP-binding protein domain" amino acids 100 to 259 (160 residues), 74.2 bits, see alignment E=1.1e-24 TIGR00436: GTP-binding protein Era" amino acids 101 to 372 (272 residues), 243.3 bits, see alignment E=3.1e-76 PF10662: PduV-EutP" amino acids 103 to 262 (160 residues), 34 bits, see alignment E=1e-11 PF02421: FeoB_N" amino acids 103 to 259 (157 residues), 43.3 bits, see alignment E=1.2e-14 PF01926: MMR_HSR1" amino acids 103 to 218 (116 residues), 84.5 bits, see alignment E=2.3e-27 PF07650: KH_2" amino acids 301 to 377 (77 residues), 60.2 bits, see alignment E=5.8e-20

Best Hits

KEGG orthology group: K03595, GTP-binding protein Era (inferred from 55% identity to xau:Xaut_3882)

Predicted SEED Role

"GTP-binding protein Era" in subsystem Bacterial Cell Division or Universal GTPases

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (394 amino acids)

>MPMX19_00844 GTPase Era (Azospirillum sp. SherDot2)
MTDGRDDIDKTKIQPGSEAAEPTPEPVPDDEALEGADLEGGDAAEGAAEDVEGDAEEGDF
DDEEDGEYEDDDYEDDEDAPRGQPISVLPPLPTMPDHPRCGFIALVGAPNAGKSTLLNAM
IGSKVSIVSPKVQTTRTRVLGITIQGDAQMIFVDTPGIFKPKRRLDRAMVAAAWQGAEDA
DVIGVLYDVSRRSIDEDTRSIVARLKEQGREAILILNKIDLVKRDVLLGIADAFRQEGIF
SDIFMVSAFTEDGVAHLKQFLADRLPDGPWHFPEDQISDMPMRLLAAEITREKLFLQLHQ
ELPYSATVETEVWEEFEDGSVKISQVIFVQRESQKAIVLGKGGQRIKALGSAARSELTHM
LERRVHLILFVKVREGWVDDPERYSAWGLDFGAS