Protein Info for MPMX19_00834 in Azospirillum sp. SherDot2

Annotation: Chaperone SurA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 486 signal peptide" amino acids 1 to 29 (29 residues), see Phobius details transmembrane" amino acids 397 to 419 (23 residues), see Phobius details PF13624: SurA_N_3" amino acids 48 to 169 (122 residues), 49.5 bits, see alignment E=1.4e-16 PF13623: SurA_N_2" amino acids 53 to 132 (80 residues), 31.4 bits, see alignment E=4.9e-11 PF09312: SurA_N" amino acids 56 to 167 (112 residues), 72.7 bits, see alignment E=8.7e-24 PF13145: Rotamase_2" amino acids 181 to 298 (118 residues), 32.5 bits, see alignment E=4.2e-11 PF13616: Rotamase_3" amino acids 200 to 293 (94 residues), 64.3 bits, see alignment E=4.5e-21 PF00639: Rotamase" amino acids 208 to 294 (87 residues), 75.3 bits, see alignment E=2e-24

Best Hits

KEGG orthology group: K03771, peptidyl-prolyl cis-trans isomerase SurA [EC: 5.2.1.8] (inferred from 93% identity to azl:AZL_011740)

Predicted SEED Role

"Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8)" in subsystem Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)

Isozymes

Compare fitness of predicted isozymes for: 5.2.1.8

Use Curated BLAST to search for 5.2.1.8

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (486 amino acids)

>MPMX19_00834 Chaperone SurA (Azospirillum sp. SherDot2)
MSSLRAVRTTVAVATACALLAMPAVAQSSKAAAGAAAPRTGDESTRQARAPGSEGIAAVV
NDEVVSVSDVNARIRMALLNAGAAANPETTKRLMPQVMRLLIDERLQMQEAKRQGVTVSA
SEIDDAVKRIAEQNRMNGQQLQEMLKRQNVPYSTLKDQIRALLAWQKVMQRRIRQEVVVG
EDEVDAAMERLKANIGKPEYLVAEIFLAVDSPDQDDEVRRNAERLVEEVKRGGNFAALAR
QFSQSAGAASGGDLGWVRSGELSPEVDKALSGMRGGQLSSPVRTATGYHIMLVRGQRPFG
SSGGETPMPVARPAAPRPQPRPDVAKATVNMKQIILPIESKEQAKSVKEQAEKLRKSIKS
CSDFQARARETGMPESGDMGTMRVKDMAPGLQNLALGIPLGQASPVLMSPAAAVILIVCK
RDMPMIQPPPEAQPAPPPPPAPTPIQEAKLPGRDEIERELVSERAELLSRRYLRDLRRTA
FIETRL