Protein Info for MPMX19_00793 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 534 signal peptide" amino acids 26 to 27 (2 residues), see Phobius details transmembrane" amino acids 28 to 47 (20 residues), see Phobius details TIGR02037: peptidase Do" amino acids 68 to 529 (462 residues), 499.2 bits, see alignment E=5.3e-154 PF00089: Trypsin" amino acids 148 to 307 (160 residues), 70.1 bits, see alignment E=7.7e-23 PF13365: Trypsin_2" amino acids 149 to 283 (135 residues), 124.8 bits, see alignment E=1.4e-39 PF00595: PDZ" amino acids 318 to 401 (84 residues), 39.6 bits, see alignment E=1.7e-13 PF13180: PDZ_2" amino acids 323 to 412 (90 residues), 59.9 bits, see alignment E=7.3e-20 PF17820: PDZ_6" amino acids 349 to 402 (54 residues), 29.6 bits, see alignment 1.4e-10

Best Hits

KEGG orthology group: K01362, [EC: 3.4.21.-] (inferred from 88% identity to azl:AZL_010810)

Predicted SEED Role

"HtrA protease/chaperone protein"

Isozymes

Compare fitness of predicted isozymes for: 3.4.21.-

Use Curated BLAST to search for 3.4.21.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (534 amino acids)

>MPMX19_00793 hypothetical protein (Azospirillum sp. SherDot2)
MTTLPPANSQSKPQHEIGRAGRLRRTVAALLLGSTVLTAPALTGWAVSQAQQNATPPAVA
MVQDTPASFADLAAKVSPAVVNIAATQEAKAEARTQRGPAIPGVPPGTPFEEFFRQFQDQ
MNRNGGPNGGPDGDQDQDQGPRGKTGALGSGFIIDPAGYVVTNNHVIDGASEITVTLQDG
TAMPAKLIGRDAKTDLALLKVKSDKPLPSVDWADSDKTRVGDWVMAVGNPFGLGGTVTKG
IVSARGRDIHSGPYDDYFQLDAAINRGNSGGPTFDLSGRVIGINTAIYSPNGGSVGIGFA
IPANLAKEVVAQLKDSGKVERGWLGVKIQEVTPDIADSVGLPSAKGALVAEVTADSPAQR
AGLHQGDVVLSYAGKPVNNLRDLTRHVADTKAGDTVDLKILREGREKTVPVRIDRLSEQQ
QMAAAETDPGKGSAEHEEVAPVKGLKLAPLDRAARKRLGIGEDVQGVVVTGLSSSVDVPV
RPGDVIERVGDTEVKSPADVRRQVTEAEKAGQKALLMLINRQGNESFVALKLKA