Protein Info for MPMX19_00787 in Azospirillum sp. SherDot2

Annotation: Sensor histidine kinase RcsC

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 452 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details PF00072: Response_reg" amino acids 328 to 440 (113 residues), 82.7 bits, see alignment E=1.1e-27

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (452 amino acids)

>MPMX19_00787 Sensor histidine kinase RcsC (Azospirillum sp. SherDot2)
MIRPSSAATEPVLLVSQALAPAGALAPLFPELVRVDTVAAALDRLRGGGAAAGETVVLLD
APTMAAVEALARLEPAPAVVVLLPEGQEHDSAGFIAAGAQDAWPVGDGEDDALRSAVSAA
RRRQMRENRLRMALAEAQRGRDEAASLLDAAGAAVAAALDPMMALTAAALESPLLPRQQD
RLLAVQAAGAALRTTVAALRSVGPGAEAEESLTLAALAADAKAMSIEGGADEEFIGDAAG
LRGLLTLLAAEGGASLSLSLRPAGDAAELTLRRRGAARLRPLVLAAVQPLVRRLGGHLPT
DGPDGAAGEWLTVRIPVRAVLRPAALSVLLVEDNPIGRLVAAGFFKALGHTVTTAEDGAQ
GLAAATDGRFDLIVMDVQMPVMDGHEAARAIRALPGEAGRVPIVALTAGTDAEDDAQCHA
AGMDDCLHKPLTMDRLRTVLERLFPGRVQAGG