Protein Info for MPMX19_00776 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 444 signal peptide" amino acids 1 to 35 (35 residues), see Phobius details PF01471: PG_binding_1" amino acids 77 to 134 (58 residues), 36.5 bits, see alignment 4.5e-13 PF03734: YkuD" amino acids 162 to 328 (167 residues), 89.4 bits, see alignment E=3.5e-29

Best Hits

KEGG orthology group: None (inferred from 87% identity to azl:AZL_010680)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (444 amino acids)

>MPMX19_00776 hypothetical protein (Azospirillum sp. SherDot2)
MIVSADLRMSRKLALLALTAASAMALLGAGPADALPYRDTLTQWADRLDAAAVELDHAPV
QTSTRIGEGGLMKLGSSGERVGRLAQRLAELGLLPADKVSEVFTTDIDRAVKAFQLAQRM
KPDGLIGAGTRAALDRTPAEAAALMRQSAVAMRSFRDTAPDNILVVNLTNQTTTLVRGGE
EELTMRAIVGRPSRETPLLTDRITHVIVNPTWTVPPTVLKEDKLPNLRAKGTPGIQNAIV
YLDGQEVAPETVDWHDVTPGRVRIVQQPGDHNALGRFRFNLTNPYDIYLHGTNEPRLFAR
ELRSISSGCVRLEDPRKLAELLLQGTSVTPERIDRLLSKQQPQWVKLAAPMPVQFVYWIA
TVEADGAVRLHPDIYDRLDDAPAAMSVPAPQPGLLPGTTPAAAPALSPAPAVMPPAGRQP
DAGRAAMPLDKSGTAEKSADKSSV