Protein Info for MPMX19_00718 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 561 transmembrane" amino acids 12 to 33 (22 residues), see Phobius details amino acids 187 to 210 (24 residues), see Phobius details PF05227: CHASE3" amino acids 43 to 179 (137 residues), 138.9 bits, see alignment E=1.6e-44 PF00672: HAMP" amino acids 210 to 256 (47 residues), 33.4 bits, see alignment 6.9e-12 PF00015: MCPsignal" amino acids 380 to 519 (140 residues), 102.8 bits, see alignment E=2.9e-33

Best Hits

KEGG orthology group: K03406, methyl-accepting chemotaxis protein (inferred from 85% identity to azl:AZL_010000)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (561 amino acids)

>MPMX19_00718 hypothetical protein (Azospirillum sp. SherDot2)
MSWFTDLRIGGKLLTAFAALIVIIGAISIANYSTLSSIQSSIGWTIHTYRVIQTTDAAMT
AMVDQETGLRGYLVSGDPAFLQPYRSGAQAFDRALAEVKSLTADNPQQQARLEELRRHAA
TWRETVADKEIALMSKADTREEARAMEAKALGKSAMDSIRALVRQIEDAERALLTARDAE
QKTAFSTGYLTAIAGALISLLVAVAAGLVLRGSIATPIVAMTAAMARLAGGDRAVEVPGV
GRRDEVGAMAEAVDVFKRNAIEADRLSAAQRAEEEAKARRAARLEELMRAFEGNVTAVVQ
SLSGAATQMQQSAGALTSTADETNRQSTTVASAAEQASANVQTVAAAAEELSSSIAEIGR
QVTQSTRVAEQAVSGANRANGVVSGLADGAQKIGEVVDLINNIAAQTNLLALNATIEAAR
AGEAGKGFAVVASEVKSLANQTAKATEDITGQIATIQGATREAVSAIEEIGRIITEISQI
SATIASAVEQQSAATQEISRNVQEAAQGTQQVTSNIVGVTRAAGDTGRAAGEVRSVADHL
TGESTRLRQEVESFLNGVKAA