Protein Info for MPMX19_00671 in Azospirillum sp. SherDot2

Annotation: Threonine synthase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 473 PF14821: Thr_synth_N" amino acids 2 to 80 (79 residues), 95.2 bits, see alignment E=3.1e-31 TIGR00260: threonine synthase" amino acids 78 to 431 (354 residues), 268.9 bits, see alignment E=3.3e-84 PF00291: PALP" amino acids 85 to 331 (247 residues), 73.8 bits, see alignment E=2.3e-24 PF24857: THR4_C" amino acids 387 to 463 (77 residues), 48 bits, see alignment E=1.7e-16

Best Hits

Swiss-Prot: 62% identical to THRC_PSEAE: Threonine synthase (thrC) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

KEGG orthology group: K01733, threonine synthase [EC: 4.2.3.1] (inferred from 97% identity to azl:AZL_009530)

Predicted SEED Role

"Threonine synthase (EC 4.2.3.1)" in subsystem Threonine and Homoserine Biosynthesis (EC 4.2.3.1)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 4.2.3.1

Use Curated BLAST to search for 4.2.3.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (473 amino acids)

>MPMX19_00671 Threonine synthase (Azospirillum sp. SherDot2)
MRYVSTRGAAPVLGFEDVLLAGLARDGGLYVPETWPQFTADDIRAMRGLPYSEIAVRVML
PFLGGSIAEDEFRAIVRDAYASFDHAAVTPLVQVDPTTWVLELFHGPTLAFKDVALQLLG
RLFDHVLTKRGQRVTIVGATSGDTGSAAIEACRDRQNVDIFILHPKGRTSEVQRRQMTSV
LSSNVHNIALDGTFDDCQDLVKAMFNDGAFRDRMGLSAVNSINWARIMAQIVYYFTAAVA
LGAPDRKLAFTVPTGNFGNVYAAYGARSMGLPMETLVVGSNSNDILARFFASGSMVAAPV
VPTLSPSMDIQISSNFERLLFDLLDRDGTAVTEALNRFRTEGKFAVTDAQLARALAIFSG
HRVDEAATMATIAEVWKDSLYLLDPHTAVGIGAAKAAVAAGRVDPTVPMVVLATAHPAKF
PDAVEKATGRRPDLPPRLSDLYVREERLSDLPNDLAAVQDFVTKRARAAQEAA