Protein Info for MPMX19_00565 in Azospirillum sp. SherDot2

Annotation: Cell division topological specificity factor

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 123 TIGR01215: cell division topological specificity factor MinE" amino acids 1 to 81 (81 residues), 94.1 bits, see alignment E=2e-31 PF03776: MinE" amino acids 14 to 81 (68 residues), 86.8 bits, see alignment E=3.7e-29

Best Hits

Swiss-Prot: 52% identical to MINE_SORC5: Cell division topological specificity factor (minE) from Sorangium cellulosum (strain So ce56)

KEGG orthology group: None (inferred from 90% identity to azl:AZL_007470)

Predicted SEED Role

"Cell division topological specificity factor MinE" in subsystem Bacterial Cell Division or Bacterial Cytoskeleton

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (123 amino acids)

>MPMX19_00565 Cell division topological specificity factor (Azospirillum sp. SherDot2)
MSIFNFFRAAPRASAVQAKERLQIVMAHERAGRSGPDYLPMLQQELLAVIAKYVNIDENK
VEVKLDRGGDCSTLEVNIELPAREQAKAAAAAKPAEKSAGNDAGAAKRPAGGAVGNGGAK
KRI