Protein Info for MPMX19_00458 in Azospirillum sp. SherDot2

Annotation: Leucine efflux protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 220 transmembrane" amino acids 12 to 32 (21 residues), see Phobius details amino acids 44 to 72 (29 residues), see Phobius details amino acids 79 to 99 (21 residues), see Phobius details amino acids 125 to 147 (23 residues), see Phobius details amino acids 159 to 183 (25 residues), see Phobius details amino acids 195 to 214 (20 residues), see Phobius details PF01810: LysE" amino acids 19 to 214 (196 residues), 130.9 bits, see alignment E=2.2e-42

Best Hits

Swiss-Prot: 34% identical to LEUE_ENT38: Leucine efflux protein (leuE) from Enterobacter sp. (strain 638)

KEGG orthology group: None (inferred from 90% identity to azl:AZL_006440)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (220 amino acids)

>MPMX19_00458 Leucine efflux protein (Azospirillum sp. SherDot2)
MTLPLDLHLLQLYMVAVCVLVLAPGPDSLLVLTRSIADGRQAGVVATIGICVGNTVHSLL
AAAGISALIAASASLFDLLRYAGGAYLAWIGLRSLWSVWTSRGAEPAPSIEAPAPAGTGR
VFVQALLTNLLNPKIILFQLAFVPQFIAPDLGHVALQTFILGNIISVLGGVYLVGIAALS
AGAARRVLSSPRVRTVLDGIAGVLFLGFAVRLLLTDRKFA