Protein Info for MPMX19_00427 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 158 transmembrane" amino acids 21 to 39 (19 residues), see Phobius details amino acids 53 to 73 (21 residues), see Phobius details amino acids 81 to 102 (22 residues), see Phobius details amino acids 107 to 126 (20 residues), see Phobius details amino acids 133 to 154 (22 residues), see Phobius details PF07331: TctB" amino acids 22 to 154 (133 residues), 38.6 bits, see alignment E=6e-14

Best Hits

KEGG orthology group: None (inferred from 85% identity to azl:AZL_006160)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (158 amino acids)

>MPMX19_00427 hypothetical protein (Azospirillum sp. SherDot2)
MTHTLRSPRPAAFRLRSPQDLAAGLLLAAIALGGLWLARNWEAGSLAMMQAGFFPRLVCY
FLLASGLATMFRALTADAPAALAWAWRPSVAITVAVVAFAALLDKLGLVLAILALIGIGG
LAGRPLRPGPFTALWATLASTCVAIFSWGLGLPLQIWP